Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23750 and ABID97_RS23755 are separated by 96 nucleotidesABID97_RS23755 and ABID97_RS23760 are separated by 73 nucleotidesABID97_RS23760 and ABID97_RS23765 are separated by 80 nucleotidesABID97_RS23765 and ABID97_RS23770 overlap by 15 nucleotides ABID97_RS23750: ABID97_RS23750 - ribose-phosphate pyrophosphokinase, at 4,917,562 to 4,918,533 _RS23750 ABID97_RS23755: ABID97_RS23755 - 50S ribosomal protein L25/general stress protein Ctc, at 4,918,630 to 4,919,295 _RS23755 ABID97_RS23760: ABID97_RS23760 - aminoacyl-tRNA hydrolase, at 4,919,369 to 4,920,001 _RS23760 ABID97_RS23765: ABID97_RS23765 - hypothetical protein, at 4,920,082 to 4,920,552 _RS23765 ABID97_RS23770: ABID97_RS23770 - YfhL family 4Fe-4S dicluster ferredoxin, at 4,920,538 to 4,920,843 _RS23770
Group Condition ABID97_RS23750 ABID97_RS23755 ABID97_RS23760 ABID97_RS23765 ABID97_RS23770
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. -0.4 N.D.
carbon source D-Mannose (C) N.D. N.D. N.D. -0.4 N.D.
carbon source L-Alanine (C) N.D. N.D. N.D. -0.2 N.D.
phage V1_10 N.D. N.D. N.D. -0.2 N.D.
carbon source L-Asparagine (C) N.D. N.D. N.D. -0.2 N.D.
carbon source D,L-Lactate (C) N.D. N.D. N.D. -0.2 N.D.
carbon source a-Ketoglutaric (C) N.D. N.D. N.D. -0.2 N.D.
carbon source L-Phenylalanine (C) N.D. N.D. N.D. -0.2 N.D.
carbon source L-Fucose (C) N.D. N.D. N.D. -0.1 N.D.
carbon source Glucuronamide (C) N.D. N.D. N.D. -0.1 N.D.
carbon source L-Histidine (C) N.D. N.D. N.D. -0.1 N.D.
carbon source D-Glucose (C) N.D. N.D. N.D. -0.1 N.D.
carbon source D,L-Lactate (C) N.D. N.D. N.D. +0.1 N.D.
carbon source pyruvate (C) N.D. N.D. N.D. +0.1 N.D.
carbon source Glycerol (C) N.D. N.D. N.D. +0.1 N.D.
carbon source succinate (C) N.D. N.D. N.D. +0.1 N.D.
carbon source propionate (C) N.D. N.D. N.D. +0.2 N.D.
carbon source L-Proline (C) N.D. N.D. N.D. +0.2 N.D.
carbon source D-Glucuronic Acid (C) N.D. N.D. N.D. +0.2 N.D.
carbon source D-Ribose (C) N.D. N.D. N.D. +0.2 N.D.
carbon source pyruvate (C) N.D. N.D. N.D. +0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. +0.2 N.D.
carbon source D-Glucose (C) N.D. N.D. N.D. +0.2 N.D.
carbon source Tween 20 (C) N.D. N.D. N.D. +0.3 N.D.
carbon source L-Alanine (C) N.D. N.D. N.D. +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. +0.3 N.D.
control NP N.D. N.D. N.D. +0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. N.D. +0.4 N.D.
carbon source acetate (C) N.D. N.D. N.D. +0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. +0.5 N.D.
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