Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23625 and ABID97_RS23630 are separated by 30 nucleotidesABID97_RS23630 and ABID97_RS23635 are separated by 2 nucleotidesABID97_RS23635 and ABID97_RS23640 are separated by 15 nucleotidesABID97_RS23640 and ABID97_RS23645 are separated by 73 nucleotides ABID97_RS23625: ABID97_RS23625 - tRNA-Ser, at 4,894,958 to 4,895,045 _RS23625 ABID97_RS23630: ABID97_RS23630 - radical SAM family heme chaperone HemW, at 4,895,076 to 4,896,335 _RS23630 ABID97_RS23635: ABID97_RS23635 - non-canonical purine NTP pyrophosphatase, at 4,896,338 to 4,896,937 _RS23635 ABID97_RS23640: ABID97_RS23640 - ribonuclease PH, at 4,896,953 to 4,897,684 _RS23640 ABID97_RS23645: ABID97_RS23645 - PP2C family serine/threonine-protein phosphatase, at 4,897,758 to 4,898,663 _RS23645
Group Condition ABID97_RS23625 ABID97_RS23630 ABID97_RS23635 ABID97_RS23640 ABID97_RS23645
phage V2_1 N.D. -0.1 -0.1 -0.0 -4.5
phage V1_1 N.D. +0.0 -0.0 +0.1 -4.6
phage V2_1 N.D. +0.0 -0.2 +0.2 -3.9
phage V1_1 N.D. -0.1 -0.1 +0.0 -3.4
phage V2_10 N.D. +0.5 +0.0 +0.3 -4.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.4 -0.3 +1.1 -3.5
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 +0.1 +0.2 -2.6
r2a outgrowth control R2A outgrowth control N.D. -0.5 +0.2 -0.2 -2.1
phage V1_10 N.D. +0.4 -0.0 +0.5 -3.3
carbon source D-Mannose (C) N.D. +0.2 +0.2 -0.0 -2.8
phage V1_10 N.D. +0.4 -0.1 +0.4 -3.1
carbon source Glucuronamide (C) N.D. -0.0 +0.2 -0.0 -2.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 -0.0 +0.1 -2.2
carbon source D-Mannose (C) N.D. +0.0 +0.1 -0.5 -1.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.1 +0.3 +0.0 -2.5
plant outgrowth control Plant outgrowth control N.D. -0.6 +0.2 -0.0 -1.8
carbon source L-Histidine (C) N.D. -0.2 +0.4 +0.1 -2.4
carbon source Glycolic Acid (C) N.D. -0.1 +0.1 -0.2 -1.9
carbon source Ethanol (C) N.D. +0.1 +0.1 +0.1 -2.0
carbon source L-Phenylalanine (C) N.D. +0.9 -1.8 +0.6 -1.3
carbon source Gly-Glu (C) N.D. -0.1 +0.1 +0.5 -2.1
carbon source Glycerol (C) N.D. +0.1 +0.1 +0.2 -2.0
phage V2_10 N.D. +0.3 -0.1 +0.6 -2.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 +0.1 +0.4 -1.4
carbon source D-Gluconic Acid (C) N.D. +0.1 +0.3 +0.0 -1.8
carbon source Gly-Glu (C) N.D. -0.1 +0.2 +0.6 -1.9
carbon source D-Gluconic Acid (C) N.D. -0.1 +0.3 +0.4 -1.7
carbon source L-Tryptophan (C) N.D. +0.3 +0.3 +0.1 -1.7
carbon source L-Phenylalanine (C) N.D. +1.1 -1.6 +0.6 -0.8
carbon source butyrate (C) N.D. -0.3 +0.2 +0.4 +2.0
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ABID97_RS23625
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ABID97_RS23630
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ABID97_RS23645
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