Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23620 and ABID97_RS23625 are separated by 410 nucleotidesABID97_RS23625 and ABID97_RS23630 are separated by 30 nucleotidesABID97_RS23630 and ABID97_RS23635 are separated by 2 nucleotidesABID97_RS23635 and ABID97_RS23640 are separated by 15 nucleotides ABID97_RS23620: ABID97_RS23620 - VCBS domain-containing protein, at 4,887,834 to 4,894,547 _RS23620 ABID97_RS23625: ABID97_RS23625 - tRNA-Ser, at 4,894,958 to 4,895,045 _RS23625 ABID97_RS23630: ABID97_RS23630 - radical SAM family heme chaperone HemW, at 4,895,076 to 4,896,335 _RS23630 ABID97_RS23635: ABID97_RS23635 - non-canonical purine NTP pyrophosphatase, at 4,896,338 to 4,896,937 _RS23635 ABID97_RS23640: ABID97_RS23640 - ribonuclease PH, at 4,896,953 to 4,897,684 _RS23640
Group Condition ABID97_RS23620 ABID97_RS23625 ABID97_RS23630 ABID97_RS23635 ABID97_RS23640
carbon source L-Arabinose (C) -0.2 N.D. -0.4 +0.2 +0.0
carbon source pyruvate (C) -0.1 N.D. -0.6 +0.2 +0.0
carbon source D-Sorbitol (C) -0.0 N.D. -0.2 +0.3 -0.4
r2a outgrowth control R2A outgrowth control +0.1 N.D. -0.5 +0.2 -0.2
carbon source L-Phenylalanine (C) +0.0 N.D. +0.9 -1.8 +0.6
plant outgrowth control Plant outgrowth control +0.0 N.D. -0.6 +0.2 -0.0
carbon source L-Malic (C) +0.0 N.D. -0.5 +0.1 +0.1
carbon source Tween 20 (C) -0.1 N.D. -0.2 +0.3 -0.1
carbon source D-Glucuronic Acid (C) -0.1 N.D. -0.5 -0.0 +0.5
carbon source L-Glutamic (C) -0.1 N.D. -0.4 +0.3 +0.2
plant outgrowth control Plant outgrowth control +0.2 N.D. -0.5 +0.2 +0.1
carbon source D,L-Lactate (C) -0.0 N.D. -0.3 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. -0.5 +0.1 +0.4
carbon source L-Phenylalanine (C) +0.1 N.D. +1.1 -1.6 +0.6
carbon source D-Lactate (C) +0.0 N.D. -0.3 +0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. -0.4 -0.3 +1.1
carbon source L-Histidine (C) +0.0 N.D. -0.2 +0.4 +0.1
carbon source butyrate (C) -0.0 N.D. -0.2 +0.2 +0.4
carbon source Fumarate (C) +0.1 N.D. -0.2 +0.2 +0.3
carbon source butyrate (C) +0.2 N.D. -0.3 +0.2 +0.4
carbon source D-Arabinose (C) -0.1 N.D. +0.1 +0.2 +0.4
phage V2_10 -0.1 N.D. +0.3 -0.1 +0.6
phage V1_10 -0.0 N.D. +0.4 -0.1 +0.4
carbon source D-Arabinose (C) -0.1 N.D. +0.2 +0.3 +0.2
carbon source D-Glucose (C) -0.0 N.D. +0.2 +0.2 +0.4
carbon source D-Gluconic Acid (C) +0.1 N.D. -0.1 +0.3 +0.4
phage V2_10 -0.0 N.D. +0.5 +0.0 +0.3
carbon source Gly-Glu (C) +0.1 N.D. -0.1 +0.2 +0.6
phage V1_10 +0.0 N.D. +0.4 -0.0 +0.5
phage V2_100 +0.1 N.D. +0.7 -0.1 +0.8
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ABID97_RS23620
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ABID97_RS23625
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ABID97_RS23640
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