Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23600 and ABID97_RS23605 are separated by 14 nucleotidesABID97_RS23605 and ABID97_RS23610 are separated by 50 nucleotidesABID97_RS23610 and ABID97_RS23615 are separated by 61 nucleotidesABID97_RS23615 and ABID97_RS23620 are separated by 52 nucleotides ABID97_RS23600: ABID97_RS23600 - hypothetical protein, at 4,883,769 to 4,884,275 _RS23600 ABID97_RS23605: ABID97_RS23605 - helix-turn-helix transcriptional regulator, at 4,884,290 to 4,884,619 _RS23605 ABID97_RS23610: ABID97_RS23610 - HlyD family type I secretion periplasmic adaptor subunit, at 4,884,670 to 4,886,007 _RS23610 ABID97_RS23615: ABID97_RS23615 - type I secretion system permease/ATPase, at 4,886,069 to 4,887,781 _RS23615 ABID97_RS23620: ABID97_RS23620 - VCBS domain-containing protein, at 4,887,834 to 4,894,547 _RS23620
Group Condition ABID97_RS23600 ABID97_RS23605 ABID97_RS23610 ABID97_RS23615 ABID97_RS23620
carbon source L-Proline (C) -0.8 -0.1 -0.2 -0.2 -0.1
carbon source Ethanol (C) -0.5 -0.1 -0.2 -0.2 -0.2
carbon source L-Arabinose (C) -0.1 -0.2 -0.5 -0.1 -0.2
carbon source L-Threonine (C) -0.8 -0.0 -0.1 -0.0 -0.1
carbon source L-Histidine (C) -0.7 -0.2 -0.1 -0.0 +0.0
carbon source L-Histidine (C) -0.1 -0.3 -0.4 -0.1 +0.0
carbon source L-Alanine (C) -0.2 -0.3 -0.6 +0.1 +0.0
carbon source Glycolic Acid (C) -0.3 -0.1 -0.2 -0.2 -0.0
carbon source D-Xylose (C) -0.5 -0.0 -0.1 +0.0 -0.1
carbon source D,L-Malic Acid (C) -0.5 -0.5 -0.0 +0.2 +0.1
carbon source Ethanol (C) -0.4 -0.1 +0.0 +0.1 -0.3
carbon source D,L-Lactate (C) -0.4 -0.1 -0.1 +0.2 -0.1
carbon source Glycerol (C) -0.6 -0.1 +0.0 +0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.0 -0.4 -0.3 +0.1
carbon source L-Glutamic (C) +0.2 -0.1 -0.1 -0.3 -0.1
carbon source Glucuronamide (C) +0.3 -0.1 -0.3 +0.0 -0.3
phage V2_100 +0.2 -0.5 -0.2 +0.2 +0.1
carbon source Adenine (C) -0.1 +0.0 -0.3 +0.3 +0.0
carbon source Formate (C) +0.6 -0.1 -0.2 -0.3 -0.1
carbon source D-Serine (C) +0.3 -0.0 -0.3 -0.1 +0.1
carbon source L-tyrosine (C) +0.5 -0.1 -0.4 -0.1 -0.0
phage V1_1 -0.4 +0.1 +0.2 +0.1 +0.1
carbon source D-Mannose (C) +0.5 +0.1 -0.1 +0.0 -0.1
r2a outgrowth control R2A outgrowth control +0.3 +0.1 +0.2 -0.3 +0.1
carbon source Glucuronamide (C) +0.7 +0.1 -0.1 -0.2 -0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +0.1 -0.0 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 +0.2 -0.4 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.2 -0.1 -0.1 -0.1
carbon source D-Serine (C) +0.7 -0.1 +0.0 -0.0 +0.0
carbon source L-Phenylalanine (C) +0.3 -0.1 +0.1 +0.3 +0.1
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