Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23470 and ABID97_RS23475 are separated by 52 nucleotidesABID97_RS23475 and ABID97_RS23480 overlap by 4 nucleotidesABID97_RS23480 and ABID97_RS23485 are separated by 82 nucleotidesABID97_RS23485 and ABID97_RS23490 are separated by 30 nucleotides ABID97_RS23470: ABID97_RS23470 - acyltransferase family protein, at 4,853,216 to 4,855,162 _RS23470 ABID97_RS23475: ABID97_RS23475 - NUDIX domain-containing protein, at 4,855,215 to 4,855,676 _RS23475 ABID97_RS23480: ABID97_RS23480 - ATP-binding protein, at 4,855,673 to 4,856,548 _RS23480 ABID97_RS23485: ABID97_RS23485 - bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ, at 4,856,631 to 4,857,860 _RS23485 ABID97_RS23490: ABID97_RS23490 - preprotein translocase subunit SecA, at 4,857,891 to 4,860,683 _RS23490
Group Condition ABID97_RS23470 ABID97_RS23475 ABID97_RS23480 ABID97_RS23485 ABID97_RS23490
carbon source L-Arabinose (C) -0.1 -0.2 -3.1 -1.1 N.D.
carbon source L-Arabinose (C) -0.1 -0.2 -3.1 -0.4 N.D.
carbon source Glucuronamide (C) -0.1 -0.1 -0.2 -3.1 N.D.
carbon source L-tyrosine (C) -0.2 -0.0 +0.1 -3.1 N.D.
carbon source L-Phenylalanine (C) +0.1 -0.8 -0.5 -1.0 N.D.
carbon source Tween 20 (C) -0.6 -0.1 +0.2 -1.4 N.D.
carbon source D-Sorbitol (C) +0.0 -0.2 -0.1 -1.6 N.D.
carbon source casaminos (C) +0.0 -0.1 -0.1 -1.7 N.D.
carbon source D-Xylose (C) +0.0 -0.0 -0.9 -0.9 N.D.
carbon source L-Proline (C) +0.0 -0.1 -0.3 -1.3 N.D.
carbon source butyrate (C) -0.2 -0.0 -0.3 -1.2 N.D.
carbon source butyrate (C) -0.0 -0.1 +0.0 -1.5 N.D.
carbon source L-Phenylalanine (C) +0.1 -0.8 -0.4 -0.4 N.D.
carbon source D-Arabinose (C) -0.1 -0.1 -0.8 -0.5 N.D.
carbon source D-Galactose (C) -0.1 -0.0 -0.1 -1.2 N.D.
carbon source Fumarate (C) -0.1 -0.1 -0.2 -1.0 N.D.
carbon source casaminos (C) -0.0 -0.1 +0.0 -1.2 N.D.
carbon source L-Leucine (C) -0.1 -0.1 -0.1 -1.0 N.D.
carbon source a-Ketoglutaric (C) -0.1 +0.2 -0.2 -1.3 N.D.
r2a outgrowth control R2A outgrowth control +0.0 -0.1 -0.1 -1.1 N.D.
carbon source L-Glutamic (C) -0.1 -0.1 -0.4 -0.7 N.D.
carbon source L-Fucose (C) -0.1 -0.3 -0.2 -0.7 N.D.
carbon source D-Lactate (C) +0.0 +0.0 +0.1 -1.3 N.D.
carbon source D-Fructose (C) +0.0 +0.0 +0.1 -1.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.2 +0.2 -0.0 -1.3 N.D.
carbon source acetate (C) +0.1 +0.2 +0.0 -0.9 N.D.
carbon source propionate (C) +0.0 +0.4 -0.1 -0.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.1 -0.1 -0.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.2 -0.0 -0.9 N.D.
carbon source L-Alanine (C) +0.0 +0.8 -0.2 -0.7 N.D.
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