Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23335 and ABID97_RS23340 are separated by 78 nucleotidesABID97_RS23340 and ABID97_RS23345 are separated by 19 nucleotidesABID97_RS23345 and ABID97_RS23350 overlap by 4 nucleotidesABID97_RS23350 and ABID97_RS23355 are separated by 218 nucleotides ABID97_RS23335: ABID97_RS23335 - ribosome biogenesis GTP-binding protein YihA/YsxC, at 4,826,434 to 4,827,189 _RS23335 ABID97_RS23340: ABID97_RS23340 - alpha/beta hydrolase, at 4,827,268 to 4,828,179 _RS23340 ABID97_RS23345: ABID97_RS23345 - lipid A biosynthesis acyltransferase, at 4,828,199 to 4,829,083 _RS23345 ABID97_RS23350: ABID97_RS23350 - lysophospholipid acyltransferase family protein, at 4,829,080 to 4,829,976 _RS23350 ABID97_RS23355: ABID97_RS23355 - methionine adenosyltransferase, at 4,830,195 to 4,831,376 _RS23355
Group Condition ABID97_RS23335 ABID97_RS23340 ABID97_RS23345 ABID97_RS23350 ABID97_RS23355
carbon source L-tyrosine (C) N.D. -0.4 N.D. N.D. N.D.
carbon source butyrate (C) N.D. -0.3 N.D. N.D. N.D.
carbon source Tween 20 (C) N.D. -0.3 N.D. N.D. N.D.
carbon source acetate (C) N.D. -0.2 N.D. N.D. N.D.
carbon source D-Fructose (C) N.D. -0.2 N.D. N.D. N.D.
carbon source L-Asparagine (C) N.D. -0.2 N.D. N.D. N.D.
carbon source D-Sorbitol (C) N.D. -0.2 N.D. N.D. N.D.
carbon source D-Xylose (C) N.D. -0.2 N.D. N.D. N.D.
carbon source L-Asparagine (C) N.D. -0.2 N.D. N.D. N.D.
carbon source D-Arabinose (C) N.D. -0.2 N.D. N.D. N.D.
carbon source L-Proline (C) N.D. +0.1 N.D. N.D. N.D.
control NP N.D. +0.2 N.D. N.D. N.D.
carbon source Glycolic Acid (C) N.D. +0.2 N.D. N.D. N.D.
carbon source propionate (C) N.D. +0.2 N.D. N.D. N.D.
carbon source Gly-Glu (C) N.D. +0.2 N.D. N.D. N.D.
carbon source casaminos (C) N.D. +0.2 N.D. N.D. N.D.
carbon source D-Xylose (C) N.D. +0.2 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control N.D. +0.2 N.D. N.D. N.D.
carbon source Ethanol (C) N.D. +0.2 N.D. N.D. N.D.
carbon source Formate (C) N.D. +0.2 N.D. N.D. N.D.
plant outgrowth control Plant outgrowth control N.D. +0.2 N.D. N.D. N.D.
phage V2_1 N.D. +0.2 N.D. N.D. N.D.
phage V2_10 N.D. +0.2 N.D. N.D. N.D.
carbon source L-Histidine (C) N.D. +0.2 N.D. N.D. N.D.
carbon source L-tyrosine (C) N.D. +0.2 N.D. N.D. N.D.
carbon source Glucuronamide (C) N.D. +0.3 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.3 N.D. N.D. N.D.
carbon source D-Ribose (C) N.D. +0.4 N.D. N.D. N.D.
carbon source L-Threonine (C) N.D. +0.5 N.D. N.D. N.D.
carbon source propionate (C) N.D. +0.7 N.D. N.D. N.D.
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ABID97_RS23335
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ABID97_RS23340
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ABID97_RS23350
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ABID97_RS23355
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