Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23290 and ABID97_RS23295 are separated by 9 nucleotidesABID97_RS23295 and ABID97_RS23300 are separated by 12 nucleotidesABID97_RS23300 and ABID97_RS23305 overlap by 4 nucleotidesABID97_RS23305 and ABID97_RS23310 are separated by 12 nucleotides ABID97_RS23290: ABID97_RS23290 - penicillin-binding protein 1A, at 4,815,945 to 4,818,353 _RS23290 ABID97_RS23295: ABID97_RS23295 - iron donor protein CyaY, at 4,818,363 to 4,818,698 _RS23295 ABID97_RS23300: ABID97_RS23300 - lipoprotein, at 4,818,711 to 4,818,980 _RS23300 ABID97_RS23305: ABID97_RS23305 - diaminopimelate decarboxylase, at 4,818,977 to 4,820,260 _RS23305 ABID97_RS23310: ABID97_RS23310 - protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 4,820,273 to 4,820,932 _RS23310
Group Condition ABID97_RS23290 ABID97_RS23295 ABID97_RS23300 ABID97_RS23305 ABID97_RS23310
carbon source D,L-Malic Acid (C) -3.6 N.D. N.D. N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 N.D. N.D. N.D. -0.1
carbon source 4-Hydroxybenzoic Acid (C) -1.9 N.D. N.D. N.D. -0.2
carbon source L-Histidine (C) -1.8 N.D. N.D. N.D. -0.0
carbon source Tween 20 (C) -1.9 N.D. N.D. N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 N.D. N.D. N.D. -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 N.D. N.D. N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) -1.7 N.D. N.D. N.D. +0.1
carbon source Tween 20 (C) -1.5 N.D. N.D. N.D. +0.1
carbon source L-Histidine (C) -1.5 N.D. N.D. N.D. +0.2
carbon source Glycolic Acid (C) -0.9 N.D. N.D. N.D. -0.3
plant outgrowth control Plant outgrowth control -1.2 N.D. N.D. N.D. +0.0
r2a outgrowth control R2A outgrowth control -1.0 N.D. N.D. N.D. -0.0
plant outgrowth control Plant outgrowth control -1.0 N.D. N.D. N.D. +0.0
r2a outgrowth control R2A outgrowth control -0.8 N.D. N.D. N.D. -0.0
carbon source L-Arabinose (C) -0.7 N.D. N.D. N.D. -0.1
r2a outgrowth control R2A outgrowth control -0.8 N.D. N.D. N.D. +0.0
carbon source D-Gluconic Acid (C) -0.7 N.D. N.D. N.D. -0.1
carbon source L-Phenylalanine (C) -0.7 N.D. N.D. N.D. +0.1
carbon source L-Arabinose (C) -0.5 N.D. N.D. N.D. -0.1
r2a outgrowth control R2A outgrowth control -0.7 N.D. N.D. N.D. +0.0
carbon source D-Serine (C) -0.4 N.D. N.D. N.D. -0.2
carbon source L-Threonine (C) -0.5 N.D. N.D. N.D. -0.1
carbon source casaminos (C) -0.5 N.D. N.D. N.D. -0.1
carbon source Glycolic Acid (C) -0.5 N.D. N.D. N.D. -0.0
carbon source D-Glucuronic Acid (C) -0.6 N.D. N.D. N.D. +0.2
carbon source L-Asparagine (C) -0.4 N.D. N.D. N.D. +0.1
carbon source L-Alanine (C) +0.4 N.D. N.D. N.D. -0.2
phage V2_100 +0.6 N.D. N.D. N.D. -0.4
carbon source L-Alanine (C) +0.5 N.D. N.D. N.D. -0.1
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ABID97_RS23295
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