Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23200 and ABID97_RS23205 are separated by 56 nucleotidesABID97_RS23205 and ABID97_RS23210 are separated by 37 nucleotidesABID97_RS23210 and ABID97_RS23215 are separated by 82 nucleotidesABID97_RS23215 and ABID97_RS23220 are separated by 65 nucleotides ABID97_RS23200: ABID97_RS23200 - VacJ family lipoprotein, at 4,794,738 to 4,795,424 _RS23200 ABID97_RS23205: ABID97_RS23205 - outer membrane lipid asymmetry maintenance protein MlaD, at 4,795,481 to 4,795,975 _RS23205 ABID97_RS23210: ABID97_RS23210 - lipid asymmetry maintenance ABC transporter permease subunit MlaE, at 4,796,013 to 4,796,795 _RS23210 ABID97_RS23215: ABID97_RS23215 - ABC transporter ATP-binding protein, at 4,796,878 to 4,797,732 _RS23215 ABID97_RS23220: ABID97_RS23220 - glutamate synthase subunit beta, at 4,797,798 to 4,799,276 _RS23220
Group Condition ABID97_RS23200 ABID97_RS23205 ABID97_RS23210 ABID97_RS23215 ABID97_RS23220
carbon source Tween 20 (C) -0.6 -0.9 -1.8 -1.4 -3.6
carbon source D,L-Malic Acid (C) -0.9 -1.0 -1.0 -1.1 -3.5
carbon source Tween 20 (C) -0.7 -0.8 -1.2 -1.1 -3.5
plant outgrowth control Plant outgrowth control -0.6 -0.6 -0.8 -0.4 -3.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.3 -0.5 +0.1 -4.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.4 -0.5 +0.2 -4.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.2 -0.2 +0.3 -4.1
carbon source L-Fucose (C) +0.3 +0.3 +0.2 +0.4 -3.9
carbon source D-Mannose (C) +0.4 +0.3 +0.1 +0.3 -3.9
carbon source Adenine (C) +0.5 +0.3 +0.2 +0.3 -4.0
carbon source L-Fucose (C) +0.5 +0.2 +0.1 +0.5 -3.9
carbon source D-Mannose (C) +0.6 +0.5 +0.2 +0.4 -4.1
carbon source Adenine (C) +0.3 +0.5 +0.4 +0.5 -3.9
carbon source D-Galactose (C) +0.6 +0.4 +0.3 +0.2 -3.6
carbon source D-Gluconic Acid (C) +0.7 +0.4 +0.1 +0.3 -3.6
carbon source D-Gluconic Acid (C) +0.9 +0.5 +0.1 +0.2 -3.5
carbon source D-Fructose (C) +0.7 +0.4 +0.3 +0.4 -3.6
carbon source Ethanol (C) +0.5 +0.6 +0.2 +0.3 -3.5
carbon source L-Tryptophan (C) +0.5 +0.6 +0.3 +0.6 -3.5
carbon source Formate (C) +0.7 +0.6 +0.5 +0.4 -3.4
carbon source L-Tryptophan (C) +0.6 +0.6 +0.4 +0.7 -3.6
carbon source butyrate (C) +0.4 +0.7 +0.5 +0.7 -3.2
carbon source D-Glucose (C) +0.7 +0.8 +0.5 +0.7 -3.8
carbon source L-Proline (C) +0.7 +0.7 +0.6 +0.6 -3.6
carbon source butyrate (C) +0.6 +0.6 +0.6 +0.7 -2.9
carbon source L-Leucine (C) +0.4 +0.7 +0.6 +0.8 -2.9
carbon source D-Glucose (C) +0.9 +0.8 +0.8 +0.9 -3.4
carbon source L-Alanine (C) +0.5 +0.7 +0.8 +1.0 -2.2
carbon source L-Alanine (C) +0.4 +1.2 +0.9 +0.9 -2.3
carbon source D-Glucuronic Acid (C) +1.3 +1.1 +1.1 +1.0 -2.6
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ABID97_RS23200
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