Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS23105 and ABID97_RS23110 are separated by 22 nucleotidesABID97_RS23110 and ABID97_RS23115 are separated by 187 nucleotidesABID97_RS23115 and ABID97_RS23120 are separated by 8 nucleotidesABID97_RS23120 and ABID97_RS23125 are separated by 12 nucleotides ABID97_RS23105: ABID97_RS23105 - imidazole glycerol phosphate synthase subunit HisF, at 4,778,482 to 4,779,267 _RS23105 ABID97_RS23110: ABID97_RS23110 - D-hexose-6-phosphate mutarotase, at 4,779,290 to 4,780,126 _RS23110 ABID97_RS23115: ABID97_RS23115 - dicarboxylate/amino acid:cation symporter, at 4,780,314 to 4,781,621 _RS23115 ABID97_RS23120: ABID97_RS23120 - amino acid ABC transporter substrate-binding protein, at 4,781,630 to 4,782,550 _RS23120 ABID97_RS23125: ABID97_RS23125 - AAA family ATPase, at 4,782,563 to 4,783,741 _RS23125
Group Condition ABID97_RS23105 ABID97_RS23110 ABID97_RS23115 ABID97_RS23120 ABID97_RS23125
phage V2_100 N.D. -0.5 -1.8 -0.3 -0.1
carbon source D-Glucose (C) N.D. -1.2 +0.2 -0.1 +0.1
carbon source D-Glucose (C) N.D. -1.0 +0.2 +0.2 +0.1
phage V1_10 N.D. -0.2 -0.6 +0.2 +0.2
phage V2_10 N.D. -0.2 -0.5 +0.3 +0.2
carbon source D-Sorbitol (C) N.D. -0.4 +0.4 +0.0 +0.2
carbon source D-Mannose (C) N.D. -0.5 +0.3 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 +0.6 +0.1 +0.1
carbon source D-Gluconic Acid (C) N.D. -0.3 +0.3 +0.1 +0.3
carbon source Gly-Glu (C) N.D. -0.0 -0.4 +0.7 +0.2
carbon source Gly-Glu (C) N.D. +0.1 -0.3 +0.6 +0.1
carbon source D,L-Malic Acid (C) N.D. -0.3 +0.5 +0.1 +0.3
carbon source D-Gluconic Acid (C) N.D. -0.3 +0.3 +0.3 +0.3
carbon source butyrate (C) N.D. -0.2 +0.2 +0.4 +0.3
carbon source D-Glucuronic Acid (C) N.D. -0.4 +0.5 +0.3 +0.3
carbon source D,L-Malic Acid (C) N.D. +0.4 +0.2 +0.2 -0.1
carbon source D-Ribose (C) N.D. -0.1 +0.4 +0.3 +0.3
carbon source L-Phenylalanine (C) N.D. +0.3 +0.2 +0.2 +0.2
carbon source L-Malic (C) N.D. +0.3 +0.3 +0.2 +0.2
carbon source pyruvate (C) N.D. +0.0 +0.4 +0.4 +0.1
carbon source Fumarate (C) N.D. +0.2 +0.4 +0.3 +0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.7 +0.3 -0.0 +0.2
carbon source D-Arabinose (C) N.D. +0.2 +0.4 +0.1 +0.3
carbon source D-Lactate (C) N.D. +0.2 +0.4 +0.2 +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.5 +0.4 +0.2 +0.1
carbon source L-Glutamic (C) N.D. +0.2 +0.6 +0.3 +0.1
carbon source L-Asparagine (C) N.D. -0.0 +1.1 +0.1 +0.1
carbon source L-Asparagine (C) N.D. -0.0 +1.4 -0.1 +0.1
carbon source Glucuronamide (C) N.D. +1.3 +0.1 +0.0 +0.1
carbon source Glucuronamide (C) N.D. +1.6 +0.3 -0.1 +0.2
remove
ABID97_RS23105
plot		 remove
ABID97_RS23110
plot		 remove
ABID97_RS23115		 remove
ABID97_RS23120
plot		 remove
ABID97_RS23125
plot