Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23015 and ABID97_RS23020 are separated by 10 nucleotidesABID97_RS23020 and ABID97_RS23025 are separated by 13 nucleotidesABID97_RS23025 and ABID97_RS23030 are separated by 340 nucleotidesABID97_RS23030 and ABID97_RS23035 overlap by 4 nucleotides ABID97_RS23015: ABID97_RS23015 - glycosyltransferase family 4 protein, at 4,763,230 to 4,764,297 _RS23015 ABID97_RS23020: ABID97_RS23020 - polysaccharide pyruvyl transferase family protein, at 4,764,308 to 4,765,456 _RS23020 ABID97_RS23025: ABID97_RS23025 - sugar transferase, at 4,765,470 to 4,766,183 _RS23025 ABID97_RS23030: ABID97_RS23030 - polysaccharide biosynthesis tyrosine autokinase, at 4,766,524 to 4,768,776 _RS23030 ABID97_RS23035: ABID97_RS23035 - low molecular weight protein-tyrosine-phosphatase, at 4,768,773 to 4,769,228 _RS23035
Group Condition ABID97_RS23015 ABID97_RS23020 ABID97_RS23025 ABID97_RS23030 ABID97_RS23035
plant outgrowth control Plant outgrowth control -5.0 N.D. -3.9 -3.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -5.0 N.D. -4.0 -1.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.3 N.D. -4.0 -2.4 N.D.
plant outgrowth control Plant outgrowth control -4.5 N.D. -3.6 -2.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.0 N.D. -3.3 -2.0 N.D.
r2a outgrowth control R2A outgrowth control -4.2 N.D. -3.5 -1.6 N.D.
r2a outgrowth control R2A outgrowth control -3.2 N.D. -3.0 -1.4 N.D.
phage V1_10 -1.1 N.D. -1.0 +2.3 N.D.
phage V1_10 -1.0 N.D. -0.8 +2.1 N.D.
phage V2_10 -1.2 N.D. -0.9 +2.6 N.D.
phage V2_10 -0.9 N.D. -1.0 +2.5 N.D.
carbon source L-Alanine (C) +0.4 N.D. +0.8 +2.3 N.D.
carbon source L-Glutamine (C) +0.7 N.D. +0.9 +2.0 N.D.
carbon source L-Malic (C) +0.2 N.D. +1.5 +2.0 N.D.
carbon source D-Fructose (C) +0.8 N.D. +0.4 +2.6 N.D.
carbon source L-Threonine (C) +0.6 N.D. +1.1 +2.1 N.D.
carbon source L-Threonine (C) +0.6 N.D. +1.1 +2.1 N.D.
carbon source L-Alanine (C) +0.5 N.D. +1.0 +2.3 N.D.
carbon source L-tyrosine (C) +0.6 N.D. +0.9 +2.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.8 N.D. +0.9 +2.3 N.D.
carbon source L-Glutamic (C) +0.8 N.D. +1.2 +2.0 N.D.
carbon source D-Arabinose (C) +1.0 N.D. +1.1 +2.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.7 N.D. +1.0 +2.5 N.D.
carbon source D-Fructose (C) +1.0 N.D. +0.6 +2.7 N.D.
carbon source L-Phenylalanine (C) +0.9 N.D. +1.1 +2.3 N.D.
carbon source D-Arabinose (C) +0.9 N.D. +1.3 +2.2 N.D.
phage V2_100 +0.1 N.D. -0.2 +4.6 N.D.
carbon source L-Histidine (C) +0.8 N.D. +0.8 +3.1 N.D.
carbon source L-Phenylalanine (C) +0.9 N.D. +1.4 +2.4 N.D.
carbon source L-Histidine (C) +1.1 N.D. +1.0 +3.1 N.D.
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ABID97_RS23015
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ABID97_RS23020
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ABID97_RS23035
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