Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22965 and ABID97_RS22970 are separated by 29 nucleotidesABID97_RS22970 and ABID97_RS22975 are separated by 93 nucleotidesABID97_RS22975 and ABID97_RS22980 are separated by 29 nucleotidesABID97_RS22980 and ABID97_RS22985 are separated by 14 nucleotides ABID97_RS22965: ABID97_RS22965 - ClpXP protease specificity-enhancing factor, at 4,752,103 to 4,752,684 _RS22965 ABID97_RS22970: ABID97_RS22970 - glutathione S-transferase N-terminal domain-containing protein, at 4,752,714 to 4,753,325 _RS22970 ABID97_RS22975: ABID97_RS22975 - cytochrome c1, at 4,753,419 to 4,754,192 _RS22975 ABID97_RS22980: ABID97_RS22980 - cytochrome bc complex cytochrome b subunit, at 4,754,222 to 4,755,658 _RS22980 ABID97_RS22985: ABID97_RS22985 - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 4,755,673 to 4,756,287 _RS22985
Group Condition ABID97_RS22965 ABID97_RS22970 ABID97_RS22975 ABID97_RS22980 ABID97_RS22985
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. -4.1 -3.1 -3.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. -4.5 -3.0 -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. -2.9 -2.4 -1.3
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. -1.9 -2.7 -1.6
carbon source L-Alanine (C) -0.2 N.D. -1.7 -1.9 -2.6
carbon source 4-Hydroxybenzoic Acid (C) -0.4 N.D. -2.0 -2.4 -1.2
carbon source L-Alanine (C) -0.2 N.D. -1.8 -1.4 -1.4
carbon source Tween 20 (C) +0.3 N.D. -1.2 -1.8 -1.3
carbon source D-Fructose (C) +0.0 N.D. -1.0 -1.6 -1.3
carbon source Tween 20 (C) +0.4 N.D. -1.1 -1.7 -1.4
carbon source D-Glucuronic Acid (C) -0.3 N.D. -1.6 -1.2 -0.6
carbon source D-Fructose (C) -0.1 N.D. -1.1 -1.2 -0.4
carbon source L-Arabinose (C) -1.6 N.D. +0.4 +0.0 +0.9
carbon source D-Arabinose (C) -1.4 N.D. +1.0 +0.7 +0.8
carbon source D-Arabinose (C) -1.1 N.D. +0.7 +1.1 +0.9
carbon source L-Malic (C) -0.5 N.D. +0.9 +0.7 +1.1
carbon source Glucuronamide (C) -0.1 N.D. +1.0 +0.9 +0.6
carbon source D-Glucose (C) -0.2 N.D. +1.0 +0.9 +1.1
carbon source L-Malic (C) -0.5 N.D. +1.2 +0.7 +1.7
carbon source Glucuronamide (C) -0.5 N.D. +1.0 +1.1 +1.7
carbon source Glycerol (C) -0.1 N.D. +1.1 +0.9 +1.5
carbon source D-Gluconic Acid (C) -0.2 N.D. +1.4 +1.1 +1.1
carbon source L-Proline (C) -0.2 N.D. +1.3 +1.1 +1.3
carbon source D-Glucose (C) +0.2 N.D. +1.2 +1.0 +1.2
carbon source Glycerol (C) -0.1 N.D. +1.3 +1.1 +1.2
carbon source D-Gluconic Acid (C) +0.2 N.D. +1.1 +0.8 +1.4
carbon source L-Proline (C) -0.2 N.D. +1.4 +1.2 +1.7
phage V2_100 +0.8 N.D. +1.7 +1.1 +2.0
carbon source butyrate (C) -0.5 N.D. +6.5 +6.1 +6.6
carbon source butyrate (C) -0.5 N.D. +7.0 +6.7 +7.3
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ABID97_RS22965
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