Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22915 and ABID97_RS22920 overlap by 4 nucleotidesABID97_RS22920 and ABID97_RS22925 are separated by 328 nucleotidesABID97_RS22925 and ABID97_RS22930 overlap by 8 nucleotidesABID97_RS22930 and ABID97_RS22935 are separated by 133 nucleotides ABID97_RS22915: ABID97_RS22915 - ATP/GTP-binding protein, at 4,743,224 to 4,743,748 _RS22915 ABID97_RS22920: ABID97_RS22920 - hypothetical protein, at 4,743,745 to 4,744,473 _RS22920 ABID97_RS22925: ABID97_RS22925 - lipoprotein-releasing ABC transporter ATP-binding protein LolD, at 4,744,802 to 4,745,479 _RS22925 ABID97_RS22930: ABID97_RS22930 - lipoprotein-releasing ABC transporter permease subunit, at 4,745,472 to 4,746,728 _RS22930 ABID97_RS22935: ABID97_RS22935 - hypothetical protein, at 4,746,862 to 4,747,830 _RS22935
Group Condition ABID97_RS22915 ABID97_RS22920 ABID97_RS22925 ABID97_RS22930 ABID97_RS22935
carbon source L-tyrosine (C) -0.4 -3.9 N.D. N.D. +0.3
carbon source D-Glucuronic Acid (C) -0.8 -0.2 N.D. N.D. -0.6
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.6 N.D. N.D. -0.4
carbon source L-Tryptophan (C) -0.0 -0.8 N.D. N.D. +0.1
phage V1_10 +0.2 -0.9 N.D. N.D. +0.2
plant outgrowth control Plant outgrowth control -0.4 +0.3 N.D. N.D. -0.3
carbon source L-Tryptophan (C) -0.3 +0.3 N.D. N.D. -0.3
carbon source L-Histidine (C) -0.4 -0.3 N.D. N.D. +0.4
carbon source D-Fructose (C) -0.3 -0.3 N.D. N.D. +0.4
carbon source casaminos (C) -0.3 +0.4 N.D. N.D. -0.3
carbon source L-tyrosine (C) -0.1 +0.4 N.D. N.D. -0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.2 +0.5 N.D. N.D. -0.7
carbon source L-Proline (C) -0.4 +0.8 N.D. N.D. -0.3
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.7 N.D. N.D. -0.5
carbon source Tween 20 (C) +0.2 +0.4 N.D. N.D. -0.2
carbon source L-Lactate (C) -0.3 +0.4 N.D. N.D. +0.4
carbon source D-Arabinose (C) -0.4 +0.7 N.D. N.D. +0.1
carbon source Fumarate (C) -0.3 +0.9 N.D. N.D. -0.1
carbon source L-Asparagine (C) +0.1 +0.7 N.D. N.D. -0.2
r2a outgrowth control R2A outgrowth control -0.0 +0.7 N.D. N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.7 N.D. N.D. -0.3
carbon source Ethanol (C) -0.2 +0.7 N.D. N.D. +0.1
carbon source butyrate (C) +0.0 +0.7 N.D. N.D. +0.1
carbon source Glycolic Acid (C) +0.2 +0.5 N.D. N.D. +0.1
phage V2_10 +0.1 +0.3 N.D. N.D. +0.4
carbon source acetate (C) +0.3 +0.4 N.D. N.D. +0.2
carbon source L-Alanine (C) +0.0 +1.0 N.D. N.D. -0.1
phage V2_100 -0.1 +0.5 N.D. N.D. +0.6
carbon source D-Fructose (C) -0.2 +1.1 N.D. N.D. +0.3
carbon source D-Arabinose (C) +0.4 +0.4 N.D. N.D. +0.5
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