Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22890 and ABID97_RS22895 are separated by 189 nucleotidesABID97_RS22895 and ABID97_RS22900 are separated by 0 nucleotidesABID97_RS22900 and ABID97_RS22905 are separated by 151 nucleotidesABID97_RS22905 and ABID97_RS22910 are separated by 99 nucleotides ABID97_RS22890: ABID97_RS22890 - ABC transporter substrate-binding protein, at 4,739,441 to 4,741,015 _RS22890 ABID97_RS22895: ABID97_RS22895 - RidA family protein, at 4,741,205 to 4,741,591 _RS22895 ABID97_RS22900: ABID97_RS22900 - ATP-dependent Clp protease proteolytic subunit, at 4,741,592 to 4,742,185 _RS22900 ABID97_RS22905: ABID97_RS22905 - hypothetical protein, at 4,742,337 to 4,742,696 _RS22905 ABID97_RS22910: ABID97_RS22910 - hypothetical protein, at 4,742,796 to 4,743,179 _RS22910
Group Condition ABID97_RS22890 ABID97_RS22895 ABID97_RS22900 ABID97_RS22905 ABID97_RS22910
carbon source L-Alanine (C) -0.0 +0.1 -0.1 -0.6 -1.6
carbon source butyrate (C) -0.2 -0.0 -0.7 -1.0 -0.1
carbon source acetate (C) -0.0 -0.1 +0.1 +0.1 -1.7
carbon source Tween 20 (C) +0.0 -0.2 -0.1 -0.0 -1.3
carbon source D-Arabinose (C) -0.0 -0.1 +0.1 -0.7 -0.7
carbon source L-tyrosine (C) -0.0 -0.1 +0.2 -0.3 -1.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.1 -0.3 -0.4 -0.5
carbon source pyruvate (C) -0.1 -0.0 +0.0 +0.1 -1.1
carbon source L-Histidine (C) +0.1 +0.1 +0.1 -0.7 -0.6
carbon source casaminos (C) -0.0 -0.2 +0.3 -0.1 -1.0
carbon source L-Asparagine (C) -0.1 -0.1 +0.3 -0.5 -0.6
carbon source butyrate (C) -0.3 -0.2 -0.4 +0.3 -0.4
carbon source L-tyrosine (C) +0.1 -0.1 -0.2 +0.7 -0.9
carbon source D-Sorbitol (C) -0.1 -0.1 +0.3 +0.2 -0.7
carbon source L-Alanine (C) +0.0 -0.0 +0.1 +0.4 -0.9
phage V1_10 -0.1 -0.1 -0.0 -0.6 +0.7
carbon source D,L-Malic Acid (C) -0.2 +0.2 +0.7 -0.5 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.2 +0.7 -0.1 -0.6
phage V2_100 -0.2 -0.2 +0.3 -0.4 +0.5
carbon source L-Glutamine (C) -0.1 -0.2 +0.3 +0.5 -0.4
carbon source D-Ribose (C) +0.0 +0.2 +0.3 -1.0 +0.6
phage V2_1 +0.0 -0.0 +0.5 +0.4 -0.7
carbon source L-Fucose (C) -0.0 +0.1 +0.1 -0.6 +0.7
carbon source D-Gluconic Acid (C) -0.1 -0.2 +0.2 +0.8 -0.2
carbon source D-Galactose (C) -0.0 -0.1 +0.9 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -0.5 +0.5 +0.9 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.0 +0.9 +0.4 -0.1
carbon source Glucuronamide (C) -0.2 -0.1 +0.4 +0.2 +0.9
r2a outgrowth control R2A outgrowth control +0.1 -0.0 +1.0 +0.1 +0.4
plant outgrowth control Plant outgrowth control +0.2 +0.0 +0.6 +0.6 +0.6
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