Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22885 and ABID97_RS22890 are separated by 27 nucleotidesABID97_RS22890 and ABID97_RS22895 are separated by 189 nucleotidesABID97_RS22895 and ABID97_RS22900 are separated by 0 nucleotidesABID97_RS22900 and ABID97_RS22905 are separated by 151 nucleotides ABID97_RS22885: ABID97_RS22885 - ABC transporter permease, at 4,738,472 to 4,739,413 _RS22885 ABID97_RS22890: ABID97_RS22890 - ABC transporter substrate-binding protein, at 4,739,441 to 4,741,015 _RS22890 ABID97_RS22895: ABID97_RS22895 - RidA family protein, at 4,741,205 to 4,741,591 _RS22895 ABID97_RS22900: ABID97_RS22900 - ATP-dependent Clp protease proteolytic subunit, at 4,741,592 to 4,742,185 _RS22900 ABID97_RS22905: ABID97_RS22905 - hypothetical protein, at 4,742,337 to 4,742,696 _RS22905
Group Condition ABID97_RS22885 ABID97_RS22890 ABID97_RS22895 ABID97_RS22900 ABID97_RS22905
carbon source butyrate (C) -1.3 -0.2 -0.0 -0.7 -1.0
phage V2_100 -1.2 -0.2 -0.2 +0.3 -0.4
carbon source pyruvate (C) -0.8 -0.1 -0.1 -0.1 -0.5
carbon source L-Arabinose (C) -2.0 +0.1 +0.0 -0.0 +0.4
carbon source D-Arabinose (C) -0.6 -0.0 -0.1 +0.1 -0.7
r2a outgrowth control R2A outgrowth control -0.8 -0.1 -0.1 -0.3 +0.1
carbon source D-Fructose (C) -0.8 +0.1 -0.0 -0.4 +0.2
carbon source butyrate (C) -0.4 -0.3 -0.2 -0.4 +0.3
carbon source D-Ribose (C) -0.5 +0.0 +0.2 +0.3 -1.0
carbon source Glycerol (C) -1.2 -0.1 -0.0 +0.4 +0.0
carbon source Fumarate (C) -0.7 +0.1 -0.1 +0.2 -0.4
carbon source D,L-Malic Acid (C) -1.1 -0.2 +0.2 +0.7 -0.5
carbon source L-Malic (C) -1.3 -0.1 -0.2 +0.1 +0.6
carbon source succinate (C) -0.8 -0.1 -0.1 +0.4 -0.1
carbon source L-Malic (C) -1.0 -0.1 -0.2 +0.4 +0.3
carbon source L-Alanine (C) -0.9 +0.0 -0.0 +0.1 +0.4
carbon source L-Threonine (C) -1.0 +0.0 +0.1 +0.3 +0.2
phage V1_10 +0.6 -0.1 -0.1 -0.0 -0.6
carbon source Tween 20 (C) -0.8 +0.1 +0.0 +0.2 +0.4
carbon source L-Glutamine (C) -0.4 -0.1 -0.2 +0.3 +0.5
carbon source L-Lactate (C) -0.6 +0.2 +0.0 +0.5 +0.1
plant outgrowth control Plant outgrowth control -0.7 +0.2 +0.0 +0.6 +0.6
carbon source propionate (C) +0.6 -0.1 -0.2 -0.1 +0.5
carbon source D-Galactose (C) -0.2 -0.0 -0.1 +0.9 +0.2
r2a outgrowth control R2A outgrowth control -0.4 +0.1 -0.0 +1.0 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.1 -0.0 +0.9 +0.4
carbon source D-Gluconic Acid (C) +0.6 -0.1 -0.2 +0.2 +0.8
carbon source L-tyrosine (C) +0.9 +0.1 -0.1 -0.2 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +0.1 -0.2 +0.7 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +0.0 -0.5 +0.5 +0.9
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