Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS22870 and ABID97_RS22875 are separated by 139 nucleotidesABID97_RS22875 and ABID97_RS22880 overlap by 1 nucleotidesABID97_RS22880 and ABID97_RS22885 are separated by 1 nucleotidesABID97_RS22885 and ABID97_RS22890 are separated by 27 nucleotides ABID97_RS22870: ABID97_RS22870 - ABC transporter ATP-binding protein, at 4,735,480 to 4,736,457 _RS22870 ABID97_RS22875: ABID97_RS22875 - ABC transporter ATP-binding protein, at 4,736,597 to 4,737,631 _RS22875 ABID97_RS22880: ABID97_RS22880 - ABC transporter permease, at 4,737,631 to 4,738,470 _RS22880 ABID97_RS22885: ABID97_RS22885 - ABC transporter permease, at 4,738,472 to 4,739,413 _RS22885 ABID97_RS22890: ABID97_RS22890 - ABC transporter substrate-binding protein, at 4,739,441 to 4,741,015 _RS22890
Group Condition ABID97_RS22870 ABID97_RS22875 ABID97_RS22880 ABID97_RS22885 ABID97_RS22890
carbon source D,L-Malic Acid (C) -1.1 -1.1 +0.2 -1.1 -0.2
carbon source L-Malic (C) -0.4 -1.0 -0.2 -1.3 -0.1
carbon source L-Arabinose (C) -0.9 +0.1 -0.1 -2.0 +0.1
carbon source Glycerol (C) -0.5 -0.2 -0.2 -1.2 -0.1
carbon source butyrate (C) -1.0 -0.2 -0.1 -0.4 -0.3
carbon source Formate (C) -0.6 -0.9 -0.1 -0.4 +0.1
carbon source butyrate (C) +0.2 -0.3 -0.2 -1.3 -0.2
carbon source L-Threonine (C) -0.5 -0.0 -0.2 -1.0 +0.0
carbon source D-Arabinose (C) -0.6 -0.4 -0.2 -0.4 -0.0
carbon source L-Malic (C) -0.5 +0.3 -0.3 -1.0 -0.1
carbon source a-Ketoglutaric (C) -0.2 -0.5 -0.2 -0.6 +0.1
carbon source L-tyrosine (C) -1.3 -1.0 +0.1 +0.9 +0.1
carbon source Formate (C) +0.1 -1.0 +0.2 -0.2 -0.3
carbon source casaminos (C) -0.6 -0.8 +0.1 +0.1 -0.0
phage V2_100 -0.1 +0.4 +0.0 -1.2 -0.2
carbon source pyruvate (C) -0.5 +0.4 -0.1 -0.8 -0.1
carbon source Fumarate (C) -0.6 +0.3 -0.0 -0.7 +0.1
carbon source L-Histidine (C) -0.4 -0.8 -0.2 +0.5 -0.0
carbon source D-Gluconic Acid (C) -0.3 +0.4 -0.1 -0.9 -0.1
plant outgrowth control Plant outgrowth control +0.2 -0.3 -0.2 -0.7 +0.2
carbon source succinate (C) -0.2 +0.5 -0.2 -0.8 -0.1
carbon source D-Lactate (C) -0.4 +0.7 -0.2 -0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -1.8 +0.2 +0.8 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 -0.5 -0.0 -0.5 +0.1
phage V2_1 -0.9 +0.3 -0.1 +0.4 +0.1
carbon source D-Mannose (C) -0.5 +0.8 -0.1 -0.3 +0.0
carbon source propionate (C) -0.8 +0.6 -0.0 +0.1 +0.1
carbon source L-Alanine (C) +0.4 +0.7 -0.0 -0.9 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.7 +0.0 +1.0 +0.1
carbon source L-Glutamine (C) +0.1 +0.9 -0.1 -0.4 -0.1
remove
ABID97_RS22870
plot		 remove
ABID97_RS22875
plot		 remove
ABID97_RS22880		 remove
ABID97_RS22885
plot		 remove
ABID97_RS22890
plot