Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22820 and ABID97_RS22825 are separated by 59 nucleotidesABID97_RS22825 and ABID97_RS22830 are separated by 63 nucleotidesABID97_RS22830 and ABID97_RS22835 overlap by 1 nucleotidesABID97_RS22835 and ABID97_RS22840 are separated by 30 nucleotides ABID97_RS22820: ABID97_RS22820 - branched-chain amino acid ABC transporter ATP-binding protein/permease, at 4,724,184 to 4,726,088 _RS22820 ABID97_RS22825: ABID97_RS22825 - ABC transporter ATP-binding protein, at 4,726,148 to 4,726,879 _RS22825 ABID97_RS22830: ABID97_RS22830 - phenylacetic acid degradation bifunctional protein PaaZ, at 4,726,943 to 4,728,997 _RS22830 ABID97_RS22835: ABID97_RS22835 - glucose 1-dehydrogenase, at 4,728,997 to 4,729,755 _RS22835 ABID97_RS22840: ABID97_RS22840 - isoprenylcysteine carboxylmethyltransferase family protein, at 4,729,786 to 4,730,346 _RS22840
Group Condition ABID97_RS22820 ABID97_RS22825 ABID97_RS22830 ABID97_RS22835 ABID97_RS22840
carbon source L-Fucose (C) -0.1 -0.7 -0.2 -0.6 +0.2
phage V1_10 -0.5 +0.3 +0.0 -0.9 -0.0
control NP -0.3 -0.7 +0.3 -0.4 +0.1
r2a outgrowth control R2A outgrowth control -0.2 -0.9 +0.1 -0.3 +0.5
carbon source D-Mannose (C) +0.3 -0.5 -0.3 -0.8 +0.5
carbon source L-Alanine (C) -0.3 +0.5 -0.5 -0.5 +0.1
phage V2_1 -0.3 +0.3 +0.2 -0.6 -0.3
carbon source D,L-Lactate (C) +0.1 -0.6 -0.1 -0.3 +0.4
carbon source L-Glutamic (C) +0.2 -0.8 -0.3 -0.0 +0.4
carbon source D,L-Malic Acid (C) +0.0 -0.8 -0.3 +0.4 +0.4
carbon source D-Mannose (C) +0.2 -0.8 +0.1 +0.1 +0.3
r2a outgrowth control R2A outgrowth control -0.1 -0.5 -0.3 +0.4 +0.5
carbon source propionate (C) -0.3 +0.7 +0.2 -0.4 -0.0
carbon source L-tyrosine (C) +0.0 +0.6 +0.0 -0.8 +0.4
carbon source D-Fructose (C) -0.2 -0.4 +0.1 +0.4 +0.4
carbon source L-tyrosine (C) +0.0 -0.7 +0.3 +0.4 +0.3
carbon source L-Alanine (C) -0.3 +0.9 -0.5 -0.3 +0.5
carbon source acetate (C) +0.3 -0.3 -0.2 +0.2 +0.5
carbon source Tween 20 (C) +0.2 +0.4 -0.1 -0.3 +0.6
carbon source L-Leucine (C) -0.2 +0.4 -0.1 +0.4 +0.5
plant outgrowth control Plant outgrowth control -0.3 +0.3 +0.3 +0.5 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.6 +0.4 +1.0 +0.1
carbon source Adenine (C) +0.3 -0.4 +0.3 +0.5 +0.5
carbon source D-Glucuronic Acid (C) +0.1 +0.4 -0.2 +0.4 +0.6
carbon source L-Glutamic (C) +0.3 -0.1 +0.0 +0.5 +0.7
carbon source D-Gluconic Acid (C) +0.4 +0.8 -0.2 +0.3 +0.3
carbon source Glycolic Acid (C) +0.3 +0.7 -0.0 +0.2 +0.4
carbon source D-Arabinose (C) +0.0 +0.8 +0.2 +0.2 +0.3
carbon source L-Lactate (C) +0.4 +0.5 +0.2 -0.2 +0.8
carbon source D,L-Lactate (C) +0.2 +0.4 -0.1 +0.7 +0.6
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ABID97_RS22820
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ABID97_RS22825
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