Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22725 and ABID97_RS22730 are separated by 91 nucleotidesABID97_RS22730 and ABID97_RS22735 are separated by 42 nucleotidesABID97_RS22735 and ABID97_RS22740 are separated by 107 nucleotidesABID97_RS22740 and ABID97_RS22745 overlap by 4 nucleotides ABID97_RS22725: ABID97_RS22725 - TatD family hydrolase, at 4,707,382 to 4,708,242 _RS22725 ABID97_RS22730: ABID97_RS22730 - trypsin-like peptidase domain-containing protein, at 4,708,334 to 4,709,341 _RS22730 ABID97_RS22735: ABID97_RS22735 - MoxR family ATPase, at 4,709,384 to 4,710,397 _RS22735 ABID97_RS22740: ABID97_RS22740 - DUF58 domain-containing protein, at 4,710,505 to 4,711,494 _RS22740 ABID97_RS22745: ABID97_RS22745 - VWA domain-containing protein, at 4,711,491 to 4,712,528 _RS22745
Group Condition ABID97_RS22725 ABID97_RS22730 ABID97_RS22735 ABID97_RS22740 ABID97_RS22745
carbon source D,L-Malic Acid (C) -1.0 N.D. -0.1 -1.1 -0.2
carbon source Adenine (C) +0.0 N.D. -0.3 -1.1 -0.6
carbon source D-Galactose (C) -0.3 N.D. -0.5 -0.5 -0.5
carbon source D-Mannose (C) -0.1 N.D. -0.1 -0.8 -0.5
carbon source a-Ketoglutaric (C) -0.8 N.D. -0.2 -0.4 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. -0.2 -0.7 -0.1
carbon source Adenine (C) -0.2 N.D. -0.1 -0.5 -0.4
carbon source L-tyrosine (C) -2.0 N.D. +0.0 +1.4 -0.6
carbon source D-Gluconic Acid (C) -0.5 N.D. -0.3 +0.1 -0.4
carbon source D-Glucose (C) -0.2 N.D. -0.0 -1.0 +0.6
carbon source butyrate (C) +0.4 N.D. -0.2 -0.1 -0.8
carbon source L-Fucose (C) -0.3 N.D. -0.3 +0.4 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. +0.3 -0.8 +0.1
carbon source L-Alanine (C) -0.1 N.D. -0.4 +0.7 -0.4
carbon source L-Lactate (C) -0.3 N.D. -0.2 +0.5 -0.3
carbon source L-Glutamine (C) -0.3 N.D. -0.1 +0.8 -0.4
carbon source Ethanol (C) -0.5 N.D. +0.2 +0.3 +0.4
carbon source acetate (C) -0.2 N.D. -0.3 +0.9 +0.0
carbon source D-Arabinose (C) -0.2 N.D. -0.2 +0.7 +0.2
carbon source propionate (C) -0.3 N.D. -0.2 +1.0 +0.0
carbon source 2-Deoxy-D-Ribose (C) -0.3 N.D. +0.0 +0.7 +0.3
carbon source 2-Deoxy-D-Ribose (C) -0.4 N.D. +0.2 +0.5 +0.4
carbon source L-tyrosine (C) -0.9 N.D. +0.1 +1.3 +0.2
carbon source D-Glucose (C) -0.4 N.D. +0.1 +0.6 +0.6
carbon source D-Xylose (C) -0.1 N.D. -0.2 +0.9 +0.3
carbon source L-Arabinose (C) +0.1 N.D. -0.3 +1.0 -0.0
carbon source D-Glucuronic Acid (C) -0.4 N.D. +0.3 +0.7 +0.4
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. +0.4 +0.6 -0.1
phage V2_100 +0.5 N.D. -0.3 +0.1 +0.9
carbon source L-Tryptophan (C) -0.1 N.D. +0.3 +0.8 +0.5
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