Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22660 and ABID97_RS22665 are separated by 102 nucleotidesABID97_RS22665 and ABID97_RS22670 are separated by 32 nucleotidesABID97_RS22670 and ABID97_RS22675 are separated by 26 nucleotidesABID97_RS22675 and ABID97_RS22680 are separated by 21 nucleotides ABID97_RS22660: ABID97_RS22660 - quinone oxidoreductase, at 4,694,043 to 4,695,026 _RS22660 ABID97_RS22665: ABID97_RS22665 - DMT family transporter, at 4,695,129 to 4,696,037 _RS22665 ABID97_RS22670: ABID97_RS22670 - SDR family oxidoreductase, at 4,696,070 to 4,696,864 _RS22670 ABID97_RS22675: ABID97_RS22675 - DMT family transporter, at 4,696,891 to 4,697,841 _RS22675 ABID97_RS22680: ABID97_RS22680 - gamma-glutamyltransferase family protein, at 4,697,863 to 4,699,476 _RS22680
Group Condition ABID97_RS22660 ABID97_RS22665 ABID97_RS22670 ABID97_RS22675 ABID97_RS22680
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.2 N.D. -0.1 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.1 N.D. -0.3 -1.0
control NP +0.0 -0.2 N.D. -0.3 -0.3
r2a outgrowth control R2A outgrowth control -0.2 -0.0 N.D. -0.5 -0.1
carbon source L-Glutamine (C) -0.2 -0.1 N.D. -0.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.2 N.D. +0.2 -1.1
carbon source L-tyrosine (C) +0.2 -0.3 N.D. -0.6 +0.1
carbon source L-Arabinose (C) -0.3 +0.0 N.D. +0.0 -0.2
phage V1_10 +0.1 -0.2 N.D. -0.0 -0.3
carbon source L-Fucose (C) -0.2 +0.1 N.D. -0.2 -0.1
phage V2_1 +0.1 -0.1 N.D. -0.2 -0.2
carbon source D-Serine (C) -0.1 +0.2 N.D. -0.3 -0.1
carbon source L-Leucine (C) +0.1 -0.2 N.D. +0.0 -0.2
carbon source L-Histidine (C) +0.1 +0.0 N.D. -0.3 -0.1
carbon source D-Sorbitol (C) -0.2 +0.0 N.D. +0.1 -0.2
carbon source casaminos (C) +0.1 +0.1 N.D. -0.3 -0.1
phage V1_10 +0.3 -0.1 N.D. -0.1 -0.2
carbon source L-Asparagine (C) +0.1 +0.1 N.D. -0.4 +0.1
carbon source Glycolic Acid (C) -0.1 +0.2 N.D. -0.2 -0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.0 +0.3 N.D. -0.2 -0.2
carbon source D,L-Malic Acid (C) +0.0 -0.3 N.D. +0.4 -0.1
carbon source a-Ketoglutaric (C) +0.1 +0.1 N.D. -0.3 +0.1
carbon source Glucuronamide (C) +0.2 +0.2 N.D. -0.3 -0.0
carbon source D-Sorbitol (C) +0.0 +0.3 N.D. +0.1 +0.1
carbon source Gly-Glu (C) +0.2 +0.2 N.D. +0.0 +0.2
carbon source D-Fructose (C) +0.1 +0.2 N.D. +0.2 +0.2
carbon source L-Lactate (C) +0.1 +0.3 N.D. +0.1 +0.1
carbon source Adenine (C) +0.1 +0.3 N.D. +0.2 +0.1
carbon source D-Lactate (C) +0.2 +0.4 N.D. +0.2 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.1 N.D. +0.4 +0.1
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