Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22555 and ABID97_RS22560 overlap by 4 nucleotidesABID97_RS22560 and ABID97_RS22565 are separated by 193 nucleotidesABID97_RS22565 and ABID97_RS22570 are separated by 158 nucleotidesABID97_RS22570 and ABID97_RS22575 overlap by 26 nucleotides ABID97_RS22555: ABID97_RS22555 - urea ABC transporter permease subunit UrtC, at 4,670,512 to 4,671,732 _RS22555 ABID97_RS22560: ABID97_RS22560 - urea ABC transporter permease subunit UrtB, at 4,671,729 to 4,673,276 _RS22560 ABID97_RS22565: ABID97_RS22565 - urea ABC transporter substrate-binding protein, at 4,673,470 to 4,674,738 _RS22565 ABID97_RS22570: ABID97_RS22570 - nucleotidyltransferase domain-containing protein, at 4,674,897 to 4,675,574 _RS22570 ABID97_RS22575: ABID97_RS22575 - hypothetical protein, at 4,675,549 to 4,675,986 _RS22575
Group Condition ABID97_RS22555 ABID97_RS22560 ABID97_RS22565 ABID97_RS22570 ABID97_RS22575
carbon source L-tyrosine (C) -0.7 -0.1 -0.5 N.D. -0.6
carbon source L-Histidine (C) -0.8 -0.1 -0.3 N.D. -0.5
carbon source D,L-Malic Acid (C) -0.8 -0.0 +0.0 N.D. -0.8
carbon source butyrate (C) -1.0 -0.0 -0.0 N.D. -0.4
carbon source a-Ketoglutaric (C) -0.4 -0.1 -0.4 N.D. -0.5
carbon source D-Gluconic Acid (C) -0.5 -0.3 -0.4 N.D. +0.0
carbon source L-Malic (C) -0.7 -0.1 -0.4 N.D. -0.1
carbon source acetate (C) -0.4 -0.2 -0.4 N.D. -0.3
carbon source succinate (C) -0.4 -0.1 -0.6 N.D. -0.1
carbon source Glycolic Acid (C) +0.1 -0.5 -0.4 N.D. -0.4
carbon source L-Alanine (C) -0.1 -0.3 -0.2 N.D. -0.6
carbon source D-Gluconic Acid (C) -0.1 -0.3 -0.5 N.D. -0.3
carbon source propionate (C) -0.2 -0.3 -0.2 N.D. -0.3
carbon source D-Xylose (C) -0.2 -0.5 -0.2 N.D. -0.1
carbon source L-Fucose (C) -0.2 -0.1 -0.5 N.D. -0.2
carbon source D-Glucose (C) -0.3 -0.1 -0.2 N.D. -0.4
carbon source D-Mannose (C) -0.2 -0.2 +0.0 N.D. -0.6
carbon source L-Asparagine (C) -0.4 -0.1 -0.5 N.D. +0.0
carbon source pyruvate (C) -0.5 -0.0 -0.2 N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.3 -0.2 N.D. +0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.2 -0.4 N.D. -0.2
carbon source D-Serine (C) +0.1 -0.0 -0.8 N.D. -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.4 +0.0 +0.1 N.D. -0.4
carbon source Formate (C) +0.1 -0.1 -0.6 N.D. +0.2
carbon source Glycolic Acid (C) +0.3 -0.2 -0.1 N.D. -0.4
carbon source propionate (C) +0.3 -0.2 +0.1 N.D. -0.4
phage V1_10 +0.5 -0.2 -0.0 N.D. -0.2
carbon source D-Lactate (C) -0.4 +0.0 -0.1 N.D. +0.6
phage V1_1 +0.5 -0.2 +0.2 N.D. -0.2
phage V1_10 +0.8 +0.3 +0.5 N.D. -0.2
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ABID97_RS22555
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