Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22385 and ABID97_RS22390 are separated by 12 nucleotidesABID97_RS22390 and ABID97_RS22395 are separated by 333 nucleotidesABID97_RS22395 and ABID97_RS22400 are separated by 8 nucleotidesABID97_RS22400 and ABID97_RS22405 are separated by 127 nucleotides ABID97_RS22385: ABID97_RS22385 - D-amino acid dehydrogenase, at 4,637,207 to 4,638,571 _RS22385 ABID97_RS22390: ABID97_RS22390 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 4,638,584 to 4,639,666 _RS22390 ABID97_RS22395: ABID97_RS22395 - ABC transporter substrate-binding protein, at 4,640,000 to 4,641,034 _RS22395 ABID97_RS22400: ABID97_RS22400 - nucleoside deaminase, at 4,641,043 to 4,641,564 _RS22400 ABID97_RS22405: ABID97_RS22405 - urease accessory protein UreD, at 4,641,692 to 4,642,522 _RS22405
Group Condition ABID97_RS22385 ABID97_RS22390 ABID97_RS22395 ABID97_RS22400 ABID97_RS22405
carbon source L-Alanine (C) -5.7 -0.0 +0.3 -0.5 N.D.
carbon source L-Tryptophan (C) -2.4 -0.2 +0.3 +0.1 N.D.
carbon source L-Tryptophan (C) -2.2 -0.2 +0.2 +0.1 N.D.
carbon source L-Alanine (C) -2.4 +0.1 +0.1 +0.4 N.D.
carbon source Glycolic Acid (C) -0.6 -0.0 -0.2 -0.4 N.D.
carbon source D-Sorbitol (C) -0.3 -0.2 -0.2 -0.6 N.D.
carbon source D-Gluconic Acid (C) -0.9 -0.0 +0.1 -0.4 N.D.
carbon source propionate (C) -0.6 -0.4 -0.0 -0.2 N.D.
carbon source D-Mannose (C) -0.5 -0.1 -0.1 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.2 -0.2 -0.3 N.D.
carbon source L-Glutamine (C) -0.5 -0.2 +0.2 -0.2 N.D.
carbon source L-Leucine (C) -0.4 -0.1 +0.1 -0.4 N.D.
carbon source L-Arabinose (C) -0.7 -0.1 +0.2 -0.2 N.D.
carbon source D,L-Malic Acid (C) -0.4 -0.0 +0.1 -0.5 N.D.
carbon source D-Galactose (C) -0.4 -0.2 -0.2 +0.2 N.D.
carbon source D-Fructose (C) -0.5 -0.1 +0.2 -0.3 N.D.
carbon source L-Histidine (C) -0.0 -0.2 +0.3 -0.7 N.D.
carbon source L-Glutamic (C) -0.6 -0.1 +0.4 -0.3 N.D.
carbon source L-Histidine (C) -0.6 -0.2 +0.1 +0.2 N.D.
carbon source L-Glutamic (C) -0.6 -0.1 +0.1 +0.2 N.D.
carbon source D-Xylose (C) -0.5 -0.2 +0.2 +0.2 N.D.
carbon source butyrate (C) -0.2 -0.5 +0.1 +0.2 N.D.
plant outgrowth control Plant outgrowth control -0.3 -0.0 -0.4 +0.6 N.D.
carbon source D,L-Malic Acid (C) +0.4 -0.2 +0.4 -0.3 N.D.
phage V2_10 +0.5 +0.0 +0.2 -0.3 N.D.
carbon source Glucuronamide (C) +0.8 +0.1 -0.3 -0.1 N.D.
carbon source butyrate (C) +0.5 -0.1 -0.1 +0.6 N.D.
r2a outgrowth control R2A outgrowth control +0.1 +0.1 +0.6 +0.2 N.D.
phage V2_100 +0.6 +0.0 +0.6 +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.2 +0.2 -0.4 +0.4 N.D.
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ABID97_RS22385
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ABID97_RS22390
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