Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS22355 and ABID97_RS22360 are separated by 10 nucleotidesABID97_RS22360 and ABID97_RS22365 are separated by 6 nucleotidesABID97_RS22365 and ABID97_RS22370 are separated by 43 nucleotidesABID97_RS22370 and ABID97_RS22375 are separated by 82 nucleotides ABID97_RS22355: ABID97_RS22355 - ABC transporter permease, at 4,633,707 to 4,634,477 _RS22355 ABID97_RS22360: ABID97_RS22360 - nucleoside deaminase, at 4,634,488 to 4,634,964 _RS22360 ABID97_RS22365: ABID97_RS22365 - oxidoreductase-like domain-containing protein, at 4,634,971 to 4,635,195 _RS22365 ABID97_RS22370: ABID97_RS22370 - lipid A hydroxylase LpxO, at 4,635,239 to 4,636,135 _RS22370 ABID97_RS22375: ABID97_RS22375 - OsmC family protein, at 4,636,218 to 4,636,616 _RS22375
Group Condition ABID97_RS22355 ABID97_RS22360 ABID97_RS22365 ABID97_RS22370 ABID97_RS22375
phage V2_10 -0.4 -0.5 N.D. +0.0 -1.0
phage V1_10 -0.1 -0.6 N.D. +0.1 -1.3
carbon source butyrate (C) +0.2 -0.3 N.D. +0.0 -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -1.0 N.D. +0.9 -1.4
carbon source L-Fucose (C) +0.2 -0.4 N.D. +0.1 -1.3
carbon source acetate (C) -0.2 -0.7 N.D. +0.0 -0.5
carbon source Glucuronamide (C) -0.0 +0.4 N.D. +0.1 -1.8
phage V2_10 -0.3 -0.4 N.D. +0.2 -0.6
carbon source Adenine (C) +0.3 -0.8 N.D. +0.2 -0.5
carbon source butyrate (C) +0.0 +0.6 N.D. +0.1 -1.5
carbon source D-Glucuronic Acid (C) +0.2 -1.2 N.D. +0.2 +0.1
r2a outgrowth control R2A outgrowth control +0.1 +0.4 N.D. +0.4 -1.6
carbon source L-tyrosine (C) +0.3 -0.4 N.D. +0.2 -0.7
carbon source acetate (C) +0.2 -0.3 N.D. +0.2 -0.7
carbon source L-Arabinose (C) -0.2 +0.8 N.D. +0.3 -1.2
carbon source L-Leucine (C) +0.0 +0.3 N.D. +0.1 -0.8
carbon source D-Fructose (C) -0.0 -0.7 N.D. +0.2 +0.5
carbon source D-Xylose (C) +0.3 -0.7 N.D. +0.1 +0.4
carbon source Tween 20 (C) +0.1 -0.7 N.D. -0.0 +0.8
carbon source L-Glutamic (C) -0.1 -0.6 N.D. +0.2 +0.8
carbon source L-Leucine (C) +0.1 -0.5 N.D. +0.1 +0.8
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.4 N.D. +0.3 +0.7
carbon source D-Ribose (C) -0.3 +0.3 N.D. +0.4 +0.4
carbon source propionate (C) -0.2 +0.1 N.D. +0.2 +0.8
carbon source D-Mannose (C) +0.3 -0.3 N.D. +0.2 +0.9
carbon source L-Phenylalanine (C) -0.1 +0.2 N.D. +0.3 +0.8
carbon source L-tyrosine (C) +0.2 +0.6 N.D. +0.1 +0.4
carbon source D-Galactose (C) -0.1 +0.1 N.D. +0.2 +1.1
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.6 N.D. +0.1 +0.8
carbon source D-Arabinose (C) -0.0 +0.6 N.D. +0.1 +0.8
remove
ABID97_RS22355
plot		 remove
ABID97_RS22360
plot		 remove
ABID97_RS22365		 remove
ABID97_RS22370
plot		 remove
ABID97_RS22375
plot