Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22295 and ABID97_RS22300 are separated by 11 nucleotidesABID97_RS22300 and ABID97_RS22305 are separated by 72 nucleotidesABID97_RS22305 and ABID97_RS22310 overlap by 1 nucleotidesABID97_RS22310 and ABID97_RS22315 are separated by 458 nucleotides ABID97_RS22295: ABID97_RS22295 - DUF2141 domain-containing protein, at 4,619,783 to 4,620,214 _RS22295 ABID97_RS22300: ABID97_RS22300 - carotenoid oxygenase family protein, at 4,620,226 to 4,621,722 _RS22300 ABID97_RS22305: ABID97_RS22305 - AzlD domain-containing protein, at 4,621,795 to 4,622,124 _RS22305 ABID97_RS22310: ABID97_RS22310 - AzlC family ABC transporter permease, at 4,622,124 to 4,622,819 _RS22310 ABID97_RS22315: ABID97_RS22315 - LysR family transcriptional regulator, at 4,623,278 to 4,624,180 _RS22315
Group Condition ABID97_RS22295 ABID97_RS22300 ABID97_RS22305 ABID97_RS22310 ABID97_RS22315
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -1.5 -2.1 -1.3 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -1.1 -1.8 -0.8 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.5 -1.2 -1.1 -1.2
plant outgrowth control Plant outgrowth control +0.1 -0.1 -2.3 -0.4 +0.0
carbon source Glycolic Acid (C) +0.0 +0.4 +0.1 +0.2 -3.2
carbon source Adenine (C) +0.3 +0.1 +0.2 +0.3 -3.5
carbon source Glycolic Acid (C) -0.1 +0.2 +0.6 +0.2 -3.2
phage V1_10 -0.2 -0.2 -1.1 -0.3 -0.5
phage V2_1 -0.2 -0.3 -1.1 -0.4 -0.2
carbon source Adenine (C) +0.0 +0.5 +0.4 +0.4 -3.5
phage V1_1 -0.1 -0.5 -0.4 -0.3 -0.6
control NP -0.4 -0.5 -0.9 -0.4 +0.4
phage V2_10 -0.6 -0.1 -1.0 -0.1 +0.3
phage V1_1 +0.3 -0.7 -0.5 -0.6 +0.4
plant outgrowth control Plant outgrowth control +0.3 -0.3 -1.0 -0.6 +0.7
carbon source L-tyrosine (C) +0.2 +0.4 -0.2 +0.4 -1.5
carbon source L-Glutamine (C) -0.0 +0.1 +0.4 +0.2 -1.3
carbon source succinate (C) -0.3 +0.3 -0.6 +0.3 -0.4
carbon source D-Glucose (C) -0.5 +0.0 -0.5 -0.2 +0.7
phage V2_100 -0.5 +0.5 -0.8 +0.1 +0.2
carbon source D,L-Malic Acid (C) -0.1 +0.3 +1.0 +0.3 -1.5
carbon source butyrate (C) -0.2 +0.3 +0.7 +0.5 -0.7
carbon source butyrate (C) -0.2 +0.6 +0.2 +0.2 +0.9
carbon source L-Threonine (C) +0.0 +0.4 +0.8 +0.2 +0.5
carbon source Tween 20 (C) +0.3 +0.6 +0.2 +0.2 +0.8
carbon source L-Alanine (C) -0.3 +0.0 +0.6 +0.5 +1.3
carbon source D-Serine (C) +0.1 +0.6 +0.6 +0.4 +0.6
carbon source D-Ribose (C) +0.1 +0.5 +0.4 +0.2 +1.1
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.6 +0.3 +0.6 +0.6
r2a outgrowth control R2A outgrowth control +0.9 +0.5 -0.3 +0.1 +1.3
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ABID97_RS22295
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ABID97_RS22300
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