Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS22285 and ABID97_RS22290 are separated by 107 nucleotidesABID97_RS22290 and ABID97_RS22295 are separated by 162 nucleotidesABID97_RS22295 and ABID97_RS22300 are separated by 11 nucleotidesABID97_RS22300 and ABID97_RS22305 are separated by 72 nucleotides ABID97_RS22285: ABID97_RS22285 - GntR family transcriptional regulator, at 4,617,726 to 4,618,430 _RS22285 ABID97_RS22290: ABID97_RS22290 - AI-2E family transporter, at 4,618,538 to 4,619,620 _RS22290 ABID97_RS22295: ABID97_RS22295 - DUF2141 domain-containing protein, at 4,619,783 to 4,620,214 _RS22295 ABID97_RS22300: ABID97_RS22300 - carotenoid oxygenase family protein, at 4,620,226 to 4,621,722 _RS22300 ABID97_RS22305: ABID97_RS22305 - AzlD domain-containing protein, at 4,621,795 to 4,622,124 _RS22305
Group Condition ABID97_RS22285 ABID97_RS22290 ABID97_RS22295 ABID97_RS22300 ABID97_RS22305
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -0.5 -0.8 -1.1 -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.5 -0.6 -1.5 -2.1
plant outgrowth control Plant outgrowth control -0.4 -0.2 +0.1 -0.1 -2.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.0 +0.1 -0.5 -1.2
carbon source D-Glucose (C) -0.4 -0.5 -0.5 +0.0 -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.6 -0.4 -0.2 +0.0
phage V1_10 +0.1 -0.0 -0.2 -0.2 -1.1
carbon source L-Alanine (C) -1.5 +0.1 +0.2 +0.5 -0.7
carbon source Gly-Glu (C) -0.8 -0.4 -0.4 -0.0 +0.3
phage V2_1 +0.3 +0.0 -0.2 -0.3 -1.1
control NP +0.5 +0.0 -0.4 -0.5 -0.9
phage V1_1 -0.1 -0.2 +0.3 -0.7 -0.5
plant outgrowth control Plant outgrowth control -0.1 -0.1 +0.3 -0.3 -1.0
phage V2_10 +0.2 +0.3 -0.6 -0.1 -1.0
carbon source D-Glucuronic Acid (C) -1.0 -0.1 -0.2 +0.3 +0.3
carbon source D-Glucose (C) -0.8 +0.3 -0.3 +0.1 +0.3
phage V2_100 +0.1 +0.2 -0.5 +0.5 -0.8
carbon source D-Gluconic Acid (C) -0.9 +0.1 +0.3 +0.0 +0.5
r2a outgrowth control R2A outgrowth control -0.1 -0.4 +0.9 +0.5 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.2 +0.3 +0.6 +0.3
carbon source D,L-Lactate (C) -0.3 +0.1 +0.2 +0.5 +0.4
carbon source L-Glutamic (C) +0.2 -0.0 -0.1 +0.5 +0.7
carbon source Tween 20 (C) +0.5 -0.1 +0.3 +0.6 +0.2
carbon source L-Threonine (C) +0.4 +0.2 +0.1 +0.3 +0.6
carbon source D-Serine (C) +0.0 +0.3 +0.1 +0.6 +0.6
carbon source L-Asparagine (C) +0.2 +0.2 +0.2 +0.3 +0.7
carbon source L-tyrosine (C) +0.8 -0.1 -0.1 +0.5 +0.5
carbon source D,L-Malic Acid (C) +0.3 +0.5 +0.4 +0.5 +0.0
carbon source L-Threonine (C) +0.7 +0.2 +0.0 +0.4 +0.8
carbon source D,L-Malic Acid (C) +0.5 +0.6 -0.1 +0.3 +1.0
remove
ABID97_RS22285
plot		 remove
ABID97_RS22290
plot		 remove
ABID97_RS22295		 remove
ABID97_RS22300
plot		 remove
ABID97_RS22305
plot