Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS22035 and ABID97_RS22040 are separated by 148 nucleotidesABID97_RS22040 and ABID97_RS22045 are separated by 82 nucleotidesABID97_RS22045 and ABID97_RS22050 are separated by 92 nucleotidesABID97_RS22050 and ABID97_RS22055 are separated by 74 nucleotides ABID97_RS22035: ABID97_RS22035 - neutral zinc metallopeptidase, at 4,558,687 to 4,559,562 _RS22035 ABID97_RS22040: ABID97_RS22040 - dCTP deaminase, at 4,559,711 to 4,560,277 _RS22040 ABID97_RS22045: ABID97_RS22045 - guanine deaminase, at 4,560,360 to 4,561,646 _RS22045 ABID97_RS22050: ABID97_RS22050 - BMP family ABC transporter substrate-binding protein, at 4,561,739 to 4,562,851 _RS22050 ABID97_RS22055: ABID97_RS22055 - LysR substrate-binding domain-containing protein, at 4,562,926 to 4,563,861 _RS22055
Group Condition ABID97_RS22035 ABID97_RS22040 ABID97_RS22045 ABID97_RS22050 ABID97_RS22055
carbon source 4-Hydroxybenzoic Acid (C) +0.0 N.D. -0.5 -0.4 -1.2
carbon source D-Arabinose (C) -0.2 N.D. +0.0 +0.1 -2.0
phage V2_100 -0.7 N.D. +0.1 -0.0 -1.3
carbon source D-Lactate (C) -0.1 N.D. -0.4 -0.1 -1.1
carbon source L-Proline (C) +0.0 N.D. -0.1 -0.0 -1.2
phage V2_10 -0.4 N.D. +0.1 -0.3 -0.7
carbon source D-Glucose (C) -0.2 N.D. -0.3 -0.2 -0.5
phage V1_10 -0.3 N.D. -0.2 -0.1 -0.5
carbon source Fumarate (C) -0.4 N.D. -0.0 +0.0 -0.6
carbon source succinate (C) -0.1 N.D. -0.0 +0.0 -0.7
carbon source D-Ribose (C) +0.2 N.D. -0.0 +0.3 -1.3
carbon source L-Histidine (C) -0.1 N.D. +0.1 +0.0 -0.7
r2a outgrowth control R2A outgrowth control +0.2 N.D. -0.1 -0.1 -0.7
carbon source D-Galactose (C) -0.4 N.D. -0.1 +0.1 -0.3
carbon source D-Mannose (C) -0.0 N.D. -0.2 +0.2 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. -0.1 +0.2 -0.6
carbon source L-Phenylalanine (C) +0.0 N.D. +0.1 +0.1 -0.7
carbon source 4-Hydroxybenzoic Acid (C) +0.3 N.D. -0.3 -0.0 -0.4
carbon source L-Malic (C) +0.1 N.D. -0.1 +0.2 -0.5
carbon source Adenine (C) +0.0 N.D. +0.8 -1.1 +0.0
carbon source D-Mannose (C) +0.3 N.D. +0.1 -0.1 -0.5
carbon source Adenine (C) +0.1 N.D. +1.1 -1.1 -0.1
carbon source L-Alanine (C) -0.2 N.D. -0.0 -0.3 +0.7
carbon source L-Threonine (C) -0.1 N.D. -0.1 -0.1 +0.5
carbon source L-tyrosine (C) -0.1 N.D. -0.1 +0.0 +0.8
carbon source butyrate (C) -0.1 N.D. -0.1 +0.1 +0.8
carbon source L-Arabinose (C) +0.1 N.D. -0.1 +0.0 +0.8
carbon source butyrate (C) +0.1 N.D. -0.1 +0.0 +0.8
carbon source L-Histidine (C) +0.0 N.D. +0.1 -0.2 +0.9
carbon source propionate (C) +0.3 N.D. -0.2 -0.0 +1.4
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