Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21975 and ABID97_RS21980 overlap by 7 nucleotidesABID97_RS21980 and ABID97_RS21985 overlap by 4 nucleotidesABID97_RS21985 and ABID97_RS21990 are separated by 22 nucleotidesABID97_RS21990 and ABID97_RS21995 are separated by 62 nucleotides ABID97_RS21975: ABID97_RS21975 - ABC transporter ATP-binding protein, at 4,546,253 to 4,547,041 _RS21975 ABID97_RS21980: ABID97_RS21980 - ABC transporter permease, at 4,547,035 to 4,548,117 _RS21980 ABID97_RS21985: ABID97_RS21985 - ABC transporter substrate-binding protein, at 4,548,114 to 4,549,115 _RS21985 ABID97_RS21990: ABID97_RS21990 - class II aldolase/adducin family protein, at 4,549,138 to 4,549,962 _RS21990 ABID97_RS21995: ABID97_RS21995 - LLM class flavin-dependent oxidoreductase, at 4,550,025 to 4,551,134 _RS21995
Group Condition ABID97_RS21975 ABID97_RS21980 ABID97_RS21985 ABID97_RS21990 ABID97_RS21995
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.1 -1.3 N.D. +0.2
r2a outgrowth control R2A outgrowth control N.D. -1.1 -0.0 N.D. -0.2
carbon source Ethanol (C) N.D. -0.5 -0.7 N.D. +0.0
carbon source L-Threonine (C) N.D. +0.1 -1.0 N.D. -0.1
carbon source L-Phenylalanine (C) N.D. -0.1 -0.9 N.D. +0.1
carbon source L-tyrosine (C) N.D. -0.2 -0.9 N.D. +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 -0.4 N.D. +0.0
phage V1_1 N.D. -0.3 -0.5 N.D. +0.1
carbon source Tween 20 (C) N.D. -0.2 -0.8 N.D. +0.4
carbon source casaminos (C) N.D. +0.2 -0.9 N.D. +0.2
carbon source D-Arabinose (C) N.D. -0.3 -0.5 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.0 -0.8 N.D. +0.3
carbon source L-Malic (C) N.D. +0.3 -0.8 N.D. +0.1
carbon source D-Glucose (C) N.D. +0.2 -0.8 N.D. +0.2
carbon source L-Proline (C) N.D. +0.3 -0.7 N.D. +0.1
carbon source D,L-Malic Acid (C) N.D. +1.1 -1.4 N.D. +0.1
carbon source Fumarate (C) N.D. -0.2 -0.5 N.D. +0.5
carbon source pyruvate (C) N.D. +0.5 -0.5 N.D. -0.1
carbon source D,L-Malic Acid (C) N.D. -0.5 +0.2 N.D. +0.4
carbon source a-Ketoglutaric (C) N.D. +0.3 -0.5 N.D. +0.3
carbon source L-Glutamine (C) N.D. +0.4 -0.4 N.D. +0.2
carbon source L-Lactate (C) N.D. +0.5 -0.2 N.D. +0.2
carbon source D-Serine (C) N.D. +0.8 -0.4 N.D. +0.0
carbon source D-Mannose (C) N.D. -0.3 +0.3 N.D. +0.5
carbon source L-Tryptophan (C) N.D. +0.5 -0.1 N.D. +0.2
carbon source butyrate (C) N.D. +0.6 -0.1 N.D. +0.2
carbon source D-Ribose (C) N.D. +0.4 +0.2 N.D. +0.4
carbon source D-Glucose (C) N.D. +0.3 +1.0 N.D. -0.0
carbon source D-Glucuronic Acid (C) N.D. +0.6 +0.6 N.D. +0.2
carbon source propionate (C) N.D. +0.7 +0.4 N.D. +0.7
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