Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21940 and ABID97_RS21945 are separated by 9 nucleotidesABID97_RS21945 and ABID97_RS21950 are separated by 23 nucleotidesABID97_RS21950 and ABID97_RS21955 are separated by 6 nucleotidesABID97_RS21955 and ABID97_RS21960 are separated by 115 nucleotides ABID97_RS21940: ABID97_RS21940 - protein kinase family protein, at 4,538,580 to 4,539,557 _RS21940 ABID97_RS21945: ABID97_RS21945 - hemolysin family protein, at 4,539,567 to 4,540,877 _RS21945 ABID97_RS21950: ABID97_RS21950 - symmetrical bis(5'-nucleosyl)-tetraphosphatase, at 4,540,901 to 4,541,752 _RS21950 ABID97_RS21955: ABID97_RS21955 - GNAT family protein, at 4,541,759 to 4,542,475 _RS21955 ABID97_RS21960: ABID97_RS21960 - PLP-dependent aminotransferase family protein, at 4,542,591 to 4,544,072 _RS21960
Group Condition ABID97_RS21940 ABID97_RS21945 ABID97_RS21950 ABID97_RS21955 ABID97_RS21960
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -4.4 -1.2 -0.5 +0.6
carbon source L-Histidine (C) -0.1 -3.6 +0.4 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -2.8 -0.3 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -4.4 +0.5 +0.0 +0.7
carbon source L-tyrosine (C) -0.1 +0.5 +0.0 -0.3 -3.0
carbon source L-Fucose (C) -0.0 -2.0 -0.2 +0.0 -0.7
carbon source L-Histidine (C) +0.2 -5.0 +0.9 +0.4 +0.6
carbon source L-Asparagine (C) +0.1 -2.2 -0.3 +0.0 -0.0
carbon source L-Threonine (C) -0.1 -2.4 -0.2 -0.1 +0.4
carbon source acetate (C) +0.0 -2.5 -0.3 -0.1 +0.6
carbon source Glycolic Acid (C) +0.1 -1.3 -0.5 +0.0 -0.6
carbon source L-tyrosine (C) +0.1 -1.8 -0.8 +0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.2 -2.4 +0.0 +0.1 +0.0
carbon source D-Mannose (C) -0.2 -1.3 -0.5 +0.0 -0.1
carbon source D-Mannose (C) +0.1 -2.0 +0.1 -0.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.2 -2.0 -0.2 +0.2 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -1.9 +0.1 +0.0 +0.1
carbon source L-Arabinose (C) -0.2 -1.1 -0.9 -0.2 +0.5
carbon source D-Sorbitol (C) +0.1 -2.2 +0.0 +0.0 +0.2
carbon source D-Xylose (C) +0.1 -2.0 -0.1 -0.1 +0.3
carbon source L-Threonine (C) -0.1 -2.5 +0.0 +0.3 +0.5
carbon source D-Xylose (C) -0.1 -2.3 +0.2 +0.0 +0.5
carbon source L-Tryptophan (C) -0.4 -1.5 +0.3 -0.1 +0.2
carbon source L-Alanine (C) +0.2 -1.3 -0.3 -0.3 +0.3
carbon source L-Asparagine (C) +0.0 -1.5 +0.5 +0.0 +0.1
carbon source D-Galactose (C) -0.1 -1.2 +0.5 +0.2 +0.2
carbon source Tween 20 (C) +0.1 -0.8 -0.5 +0.3 +0.6
carbon source L-Proline (C) +0.1 -1.2 +0.3 +0.1 +0.5
carbon source Gly-Glu (C) -0.1 -1.0 +0.5 -0.0 +0.5
carbon source L-Fucose (C) +0.3 -1.2 +0.5 -0.1 +0.4
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