Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS21820 and ABID97_RS21825 are separated by 468 nucleotidesABID97_RS21825 and ABID97_RS21830 are separated by 30 nucleotidesABID97_RS21830 and ABID97_RS21835 are separated by 178 nucleotidesABID97_RS21835 and ABID97_RS21840 are separated by 30 nucleotides ABID97_RS21820: ABID97_RS21820 - DNA (cytosine-5-)-methyltransferase, at 4,513,024 to 4,514,271 _RS21820 ABID97_RS21825: ABID97_RS21825 - helix-turn-helix transcriptional regulator, at 4,514,740 to 4,515,048 _RS21825 ABID97_RS21830: ABID97_RS21830 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase, at 4,515,079 to 4,516,044 _RS21830 ABID97_RS21835: ABID97_RS21835 - transglycosylase domain-containing protein, at 4,516,223 to 4,519,225 _RS21835 ABID97_RS21840: ABID97_RS21840 - SMP-30/gluconolactonase/LRE family protein, at 4,519,256 to 4,520,185 _RS21840
Group Condition ABID97_RS21820 ABID97_RS21825 ABID97_RS21830 ABID97_RS21835 ABID97_RS21840
carbon source L-tyrosine (C) N.D. -0.2 N.D. -0.1 -0.2
carbon source D-Gluconic Acid (C) N.D. -0.4 N.D. -0.1 -0.1
carbon source D-Arabinose (C) N.D. -0.4 N.D. -0.0 -0.1
carbon source D-Galactose (C) N.D. -0.3 N.D. -0.2 -0.0
carbon source L-Lactate (C) N.D. -0.2 N.D. -0.2 -0.0
carbon source L-Threonine (C) N.D. -0.4 N.D. -0.2 +0.1
carbon source L-Asparagine (C) N.D. -0.2 N.D. -0.2 -0.1
carbon source pyruvate (C) N.D. -0.4 N.D. -0.1 +0.1
carbon source L-Leucine (C) N.D. -0.3 N.D. -0.2 -0.0
carbon source acetate (C) N.D. -0.3 N.D. -0.1 -0.0
carbon source L-Malic (C) N.D. -0.2 N.D. -0.1 -0.1
carbon source D-Glucose (C) N.D. -0.3 N.D. -0.2 +0.1
carbon source L-Glutamic (C) N.D. -0.3 N.D. -0.2 +0.1
carbon source L-tyrosine (C) N.D. -0.5 N.D. +0.1 +0.0
carbon source L-Phenylalanine (C) N.D. -0.3 N.D. +0.0 -0.1
phage V2_100 N.D. -0.2 N.D. +0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 N.D. +0.2 -0.3
carbon source Glycerol (C) N.D. -0.3 N.D. -0.1 +0.2
carbon source Ethanol (C) N.D. -0.3 N.D. -0.1 +0.2
carbon source D,L-Malic Acid (C) N.D. +0.2 N.D. -0.4 -0.0
carbon source Adenine (C) N.D. -0.1 N.D. -0.2 +0.2
carbon source D-Ribose (C) N.D. -0.2 N.D. -0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.0 N.D. +0.1 -0.2
carbon source propionate (C) N.D. -0.2 N.D. +0.2 -0.0
carbon source D-Sorbitol (C) N.D. -0.2 N.D. +0.0 +0.2
carbon source L-Glutamine (C) N.D. -0.3 N.D. +0.1 +0.3
carbon source casaminos (C) N.D. -0.2 N.D. +0.1 +0.2
carbon source L-Histidine (C) N.D. -0.3 N.D. +0.3 +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.2 N.D. -0.0 +0.4
carbon source butyrate (C) N.D. -0.2 N.D. +0.3 +0.2
remove
ABID97_RS21820
plot		 remove
ABID97_RS21825
plot		 remove
ABID97_RS21830		 remove
ABID97_RS21835
plot		 remove
ABID97_RS21840
plot