Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21690 and ABID97_RS21695 are separated by 9 nucleotidesABID97_RS21695 and ABID97_RS21700 are separated by 5 nucleotidesABID97_RS21700 and ABID97_RS21705 are separated by 55 nucleotidesABID97_RS21705 and ABID97_RS21710 overlap by 4 nucleotides ABID97_RS21690: ABID97_RS21690 - retropepsin-like aspartic protease, at 4,486,038 to 4,486,679 _RS21690 ABID97_RS21695: ABID97_RS21695 - RidA family protein, at 4,486,689 to 4,487,042 _RS21695 ABID97_RS21700: ABID97_RS21700 - glycerol-3-phosphate 1-O-acyltransferase PlsY, at 4,487,048 to 4,487,683 _RS21700 ABID97_RS21705: ABID97_RS21705 - aminoacyl-tRNA deacylase, at 4,487,739 to 4,488,230 _RS21705 ABID97_RS21710: ABID97_RS21710 - aldo/keto reductase, at 4,488,227 to 4,489,288 _RS21710
Group Condition ABID97_RS21690 ABID97_RS21695 ABID97_RS21700 ABID97_RS21705 ABID97_RS21710
carbon source propionate (C) -0.4 N.D. N.D. -0.2 -0.1
carbon source L-tyrosine (C) -0.2 N.D. N.D. -0.1 -0.3
carbon source butyrate (C) -0.2 N.D. N.D. -0.2 -0.2
carbon source D-Arabinose (C) -0.4 N.D. N.D. -0.0 -0.2
carbon source D,L-Lactate (C) -0.2 N.D. N.D. -0.2 -0.2
carbon source D-Ribose (C) -0.3 N.D. N.D. -0.2 -0.0
carbon source L-Fucose (C) -0.1 N.D. N.D. -0.4 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.2 N.D. N.D. -0.2 -0.2
carbon source a-Ketoglutaric (C) -0.1 N.D. N.D. -0.2 -0.2
carbon source D-Serine (C) -0.2 N.D. N.D. -0.4 +0.0
carbon source L-Arabinose (C) -0.3 N.D. N.D. -0.1 -0.2
carbon source L-Threonine (C) -0.2 N.D. N.D. -0.1 -0.1
carbon source L-Leucine (C) -0.2 N.D. N.D. -0.3 -0.0
carbon source L-Histidine (C) -0.3 N.D. N.D. -0.2 +0.0
carbon source D-Sorbitol (C) -0.3 N.D. N.D. +0.1 -0.2
carbon source Tween 20 (C) -0.5 N.D. N.D. +0.3 -0.1
carbon source L-tyrosine (C) -0.3 N.D. N.D. +0.4 -0.3
carbon source L-Alanine (C) -0.2 N.D. N.D. +0.1 -0.1
carbon source L-Alanine (C) -0.2 N.D. N.D. +0.2 -0.1
carbon source D-Serine (C) -0.1 N.D. N.D. +0.2 -0.1
carbon source D,L-Malic Acid (C) -0.2 N.D. N.D. +0.4 +0.0
carbon source Gly-Glu (C) -0.1 N.D. N.D. +0.4 +0.1
carbon source L-Lactate (C) -0.0 N.D. N.D. +0.4 +0.1
phage V2_10 +0.3 N.D. N.D. +0.0 +0.2
phage V2_100 +0.3 N.D. N.D. +0.2 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 N.D. N.D. +0.2 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.3 N.D. N.D. +0.3 +0.3
carbon source propionate (C) +0.2 N.D. N.D. +0.8 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 N.D. N.D. +0.3 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 N.D. N.D. +0.4 +0.2
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