Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21675 and ABID97_RS21680 overlap by 1 nucleotidesABID97_RS21680 and ABID97_RS21685 are separated by 44 nucleotidesABID97_RS21685 and ABID97_RS21690 are separated by 7 nucleotidesABID97_RS21690 and ABID97_RS21695 are separated by 9 nucleotides ABID97_RS21675: ABID97_RS21675 - hypothetical protein, at 4,483,609 to 4,484,448 _RS21675 ABID97_RS21680: ABID97_RS21680 - UDP-N-acetylmuramate dehydrogenase, at 4,484,448 to 4,485,500 _RS21680 ABID97_RS21685: ABID97_RS21685 - YajQ family cyclic di-GMP-binding protein, at 4,485,545 to 4,486,030 _RS21685 ABID97_RS21690: ABID97_RS21690 - retropepsin-like aspartic protease, at 4,486,038 to 4,486,679 _RS21690 ABID97_RS21695: ABID97_RS21695 - RidA family protein, at 4,486,689 to 4,487,042 _RS21695
Group Condition ABID97_RS21675 ABID97_RS21680 ABID97_RS21685 ABID97_RS21690 ABID97_RS21695
carbon source butyrate (C) -0.3 N.D. N.D. -0.2 N.D.
carbon source Tween 20 (C) -0.0 N.D. N.D. -0.5 N.D.
carbon source D-Serine (C) -0.3 N.D. N.D. -0.2 N.D.
carbon source Adenine (C) -0.3 N.D. N.D. -0.1 N.D.
carbon source L-tyrosine (C) -0.2 N.D. N.D. -0.2 N.D.
carbon source acetate (C) -0.1 N.D. N.D. -0.3 N.D.
carbon source L-Glutamine (C) -0.1 N.D. N.D. -0.3 N.D.
carbon source L-Arabinose (C) -0.1 N.D. N.D. -0.3 N.D.
carbon source D-Sorbitol (C) -0.1 N.D. N.D. -0.3 N.D.
carbon source L-Alanine (C) -0.2 N.D. N.D. -0.2 N.D.
carbon source Formate (C) -0.2 N.D. N.D. -0.2 N.D.
carbon source D-Ribose (C) -0.1 N.D. N.D. -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 N.D. N.D. -0.2 N.D.
carbon source pyruvate (C) -0.2 N.D. N.D. -0.2 N.D.
carbon source D-Ribose (C) -0.1 N.D. N.D. -0.3 N.D.
carbon source D-Arabinose (C) +0.0 N.D. N.D. -0.4 N.D.
r2a outgrowth control R2A outgrowth control -0.4 N.D. N.D. +0.0 N.D.
r2a outgrowth control R2A outgrowth control -0.3 N.D. N.D. +0.1 N.D.
carbon source L-Asparagine (C) +0.1 N.D. N.D. -0.3 N.D.
carbon source L-Histidine (C) +0.1 N.D. N.D. -0.3 N.D.
phage V2_100 -0.4 N.D. N.D. +0.3 N.D.
carbon source Gly-Glu (C) +0.3 N.D. N.D. -0.1 N.D.
carbon source D-Serine (C) +0.3 N.D. N.D. -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. N.D. +0.4 N.D.
carbon source D-Glucose (C) +0.3 N.D. N.D. +0.1 N.D.
phage V2_10 +0.2 N.D. N.D. +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. N.D. +0.4 N.D.
carbon source propionate (C) +1.0 N.D. N.D. -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 N.D. N.D. +0.6 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.4 N.D. N.D. +0.3 N.D.
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