Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21570 and ABID97_RS21575 are separated by 32 nucleotidesABID97_RS21575 and ABID97_RS21580 are separated by 49 nucleotidesABID97_RS21580 and ABID97_RS21585 are separated by 26 nucleotidesABID97_RS21585 and ABID97_RS21590 are separated by 160 nucleotides ABID97_RS21570: ABID97_RS21570 - ABC transporter permease, at 4,465,521 to 4,466,765 _RS21570 ABID97_RS21575: ABID97_RS21575 - ABC transporter substrate-binding protein, at 4,466,798 to 4,467,826 _RS21575 ABID97_RS21580: ABID97_RS21580 - ABC transporter ATP-binding protein, at 4,467,876 to 4,468,970 _RS21580 ABID97_RS21585: ABID97_RS21585 - 4-aminobutyrate--2-oxoglutarate transaminase, at 4,468,997 to 4,470,289 _RS21585 ABID97_RS21590: ABID97_RS21590 - PLP-dependent aminotransferase family protein, at 4,470,450 to 4,471,862 _RS21590
Group Condition ABID97_RS21570 ABID97_RS21575 ABID97_RS21580 ABID97_RS21585 ABID97_RS21590
carbon source L-tyrosine (C) -0.1 -0.2 -0.4 -0.2 -0.3
carbon source Ethanol (C) -0.1 -0.2 -0.3 -0.1 -0.3
carbon source propionate (C) -0.0 -0.1 -0.5 -0.2 -0.0
carbon source Glucuronamide (C) -0.1 -0.2 -0.3 -0.2 -0.1
carbon source a-Ketoglutaric (C) -0.2 +0.2 -0.3 -0.1 -0.3
carbon source D-Galactose (C) -0.3 +0.2 -0.2 -0.4 +0.0
carbon source L-Threonine (C) +0.1 -0.3 -0.1 -0.1 -0.2
carbon source L-Fucose (C) +0.0 +0.1 -0.1 -0.3 -0.3
carbon source L-tyrosine (C) +0.3 -0.0 -0.2 -0.1 -0.4
phage V2_100 +0.3 -0.1 +0.0 -0.2 -0.4
carbon source D,L-Malic Acid (C) +0.2 -0.1 -0.3 -0.1 -0.1
carbon source Formate (C) +0.1 +0.2 -0.1 -0.3 -0.3
carbon source D-Arabinose (C) +0.0 +0.3 -0.4 -0.1 -0.2
carbon source pyruvate (C) +0.1 +0.1 -0.2 -0.2 -0.2
carbon source D-Serine (C) +0.1 -0.1 +0.2 -0.2 -0.3
carbon source D-Serine (C) +0.3 +0.1 -0.1 -0.3 -0.2
carbon source Fumarate (C) +0.2 +0.1 -0.4 +0.2 -0.2
carbon source D-Ribose (C) +0.1 +0.3 -0.3 +0.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.3 -0.3 +0.3 -0.1
carbon source L-Arabinose (C) +0.5 +0.1 -0.3 +0.2 -0.1
carbon source butyrate (C) +0.2 +0.1 +0.3 +0.2 -0.3
carbon source L-Tryptophan (C) +0.2 +0.3 +0.3 -0.1 -0.0
carbon source butyrate (C) +0.2 +0.1 +0.2 +0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.0 +0.0 +0.2 +0.3
carbon source L-Phenylalanine (C) +0.4 +0.5 +0.2 -0.1 -0.1
carbon source Gly-Glu (C) +0.2 +0.2 +0.1 +0.3 +0.2
carbon source D-Glucose (C) +0.3 +0.4 +0.1 +0.2 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.3 +0.3 +0.2 +0.0
carbon source D-Lactate (C) +0.3 +0.3 +0.3 +0.2 +0.1
carbon source propionate (C) +1.1 +0.3 +0.2 -0.1 -0.0
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ABID97_RS21570
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ABID97_RS21575
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ABID97_RS21585
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ABID97_RS21590
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