Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21245 and ABID97_RS21250 are separated by 17 nucleotidesABID97_RS21250 and ABID97_RS21255 are separated by 140 nucleotidesABID97_RS21255 and ABID97_RS21260 are separated by 34 nucleotidesABID97_RS21260 and ABID97_RS21265 overlap by 4 nucleotides ABID97_RS21245: ABID97_RS21245 - PaaI family thioesterase, at 4,385,635 to 4,386,180 _RS21245 ABID97_RS21250: ABID97_RS21250 - nitroreductase, at 4,386,198 to 4,386,890 _RS21250 ABID97_RS21255: ABID97_RS21255 - Fe(3+) ABC transporter substrate-binding protein, at 4,387,031 to 4,388,092 _RS21255 ABID97_RS21260: ABID97_RS21260 - iron ABC transporter permease, at 4,388,127 to 4,389,806 _RS21260 ABID97_RS21265: ABID97_RS21265 - ABC transporter ATP-binding protein, at 4,389,803 to 4,390,486 _RS21265
Group Condition ABID97_RS21245 ABID97_RS21250 ABID97_RS21255 ABID97_RS21260 ABID97_RS21265
carbon source L-Leucine (C) +0.1 -0.1 -0.1 -0.1 -0.8
carbon source a-Ketoglutaric (C) +0.1 -0.2 +0.1 +0.0 -0.8
carbon source L-Phenylalanine (C) +0.2 -0.3 -0.2 -0.1 -0.4
carbon source L-Malic (C) +0.3 -0.3 +0.0 -0.0 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.2 -0.3 -0.3 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.5 -0.2 -0.3 +0.5
carbon source L-Phenylalanine (C) +0.3 +0.1 -0.2 -0.3 -0.4
carbon source L-Threonine (C) +0.3 +0.2 +0.2 +0.1 -0.6
carbon source L-Alanine (C) +0.3 -0.2 +0.4 -0.1 -0.3
carbon source Ethanol (C) +0.2 +0.5 +0.1 +0.1 -0.7
carbon source D-Arabinose (C) +0.4 +0.3 +0.1 -0.2 -0.2
carbon source L-tyrosine (C) +0.3 -0.2 +0.4 +0.3 -0.3
carbon source acetate (C) +0.4 -0.4 +0.1 -0.1 +0.6
carbon source Tween 20 (C) +0.3 -0.7 +0.3 +0.3 +0.5
carbon source D-Ribose (C) +0.2 +0.5 +0.3 +0.2 -0.5
carbon source Glucuronamide (C) -0.1 +0.4 +0.2 +0.4 -0.2
carbon source L-Histidine (C) +0.2 -0.4 +0.2 +0.4 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.3 -0.3 +0.3 +0.3 +0.2
phage V2_10 +0.5 +0.3 -0.1 -0.2 +0.3
phage V2_1 -0.1 +0.2 -0.1 +0.0 +0.8
carbon source Formate (C) +0.5 -0.3 +0.1 +0.2 +0.3
carbon source L-Lactate (C) +0.5 -0.3 +0.1 +0.1 +0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.4 +0.2 +0.2 -0.2 +0.4
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.1 +0.2 +0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.2 -0.5 -0.3 +1.5
carbon source D-Gluconic Acid (C) +0.4 +0.2 +0.2 +0.2 +0.2
carbon source butyrate (C) -0.0 +0.1 +0.4 +0.1 +0.7
carbon source D,L-Malic Acid (C) -0.1 +0.2 +0.3 +0.4 +0.6
phage V1_10 +0.6 +0.4 -0.1 -0.1 +1.2
phage V2_100 +1.2 +0.2 +0.1 +0.3 +0.6
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ABID97_RS21245
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