Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21230 and ABID97_RS21235 are separated by 35 nucleotidesABID97_RS21235 and ABID97_RS21240 overlap by 8 nucleotidesABID97_RS21240 and ABID97_RS21245 are separated by 51 nucleotidesABID97_RS21245 and ABID97_RS21250 are separated by 17 nucleotides ABID97_RS21230: ABID97_RS21230 - MATE family efflux transporter, at 4,382,419 to 4,383,825 _RS21230 ABID97_RS21235: ABID97_RS21235 - MFS transporter, at 4,383,861 to 4,385,096 _RS21235 ABID97_RS21240: ABID97_RS21240 - MarR family winged helix-turn-helix transcriptional regulator, at 4,385,089 to 4,385,583 _RS21240 ABID97_RS21245: ABID97_RS21245 - PaaI family thioesterase, at 4,385,635 to 4,386,180 _RS21245 ABID97_RS21250: ABID97_RS21250 - nitroreductase, at 4,386,198 to 4,386,890 _RS21250
Group Condition ABID97_RS21230 ABID97_RS21235 ABID97_RS21240 ABID97_RS21245 ABID97_RS21250
carbon source Fumarate (C) +0.0 -0.2 -0.4 +0.1 -0.4
carbon source acetate (C) +0.1 -0.3 -0.5 +0.4 -0.4
carbon source Glycolic Acid (C) -0.1 +0.2 -0.4 +0.1 -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.3 +0.3 +0.1 -0.3
carbon source Adenine (C) -0.1 -0.2 -0.4 +0.3 +0.1
carbon source D-Glucose (C) -0.3 -0.3 +0.3 -0.1 +0.1
carbon source L-Phenylalanine (C) -0.1 -0.4 -0.2 +0.3 +0.1
carbon source L-tyrosine (C) +0.4 -0.1 +0.2 +0.0 -0.5
carbon source D,L-Malic Acid (C) +0.3 +0.2 -0.6 -0.1 +0.2
carbon source Tween 20 (C) +0.2 +0.1 +0.1 +0.3 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.1 +0.5 -0.7 -0.2
carbon source D-Ribose (C) -0.1 -0.1 -0.2 +0.2 +0.5
carbon source L-Arabinose (C) +0.1 -0.2 -0.2 +0.4 +0.2
carbon source L-Histidine (C) +0.3 +0.4 -0.1 +0.2 -0.4
carbon source Formate (C) +0.2 +0.2 -0.0 +0.5 -0.3
carbon source L-Alanine (C) +0.2 +0.5 -0.3 +0.3 -0.2
carbon source L-tyrosine (C) +0.0 +0.3 +0.4 +0.3 -0.2
phage V1_10 +0.1 -0.2 +0.6 -0.0 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.0 +0.6 +0.2 +0.2
carbon source D-Gluconic Acid (C) +0.3 -0.2 +0.3 +0.4 +0.2
carbon source butyrate (C) +0.3 +0.2 +0.6 -0.1 -0.0
carbon source Ethanol (C) +0.2 -0.1 +0.3 +0.4 +0.2
phage V1_10 +0.1 -0.5 +0.5 +0.6 +0.4
phage V2_10 +0.1 +0.0 +0.4 +0.4 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.2 +0.3 +0.4 +0.2
phage V2_10 +0.1 +0.2 +0.2 +0.5 +0.3
carbon source D-Glucose (C) +0.4 +0.4 +0.2 +0.3 +0.1
carbon source D-Arabinose (C) -0.2 +0.4 +0.6 +0.4 +0.3
phage V2_100 -0.1 -0.1 +0.8 +1.2 +0.2
carbon source propionate (C) +0.2 +0.1 +1.7 +0.2 +0.3
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ABID97_RS21230
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ABID97_RS21235
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ABID97_RS21250
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