Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS21175 and ABID97_RS21180 are separated by 26 nucleotidesABID97_RS21180 and ABID97_RS21185 are separated by 19 nucleotidesABID97_RS21185 and ABID97_RS21190 overlap by 4 nucleotidesABID97_RS21190 and ABID97_RS21195 are separated by 36 nucleotides ABID97_RS21175: ABID97_RS21175 - endonuclease/exonuclease/phosphatase family protein, at 4,371,552 to 4,372,565 _RS21175 ABID97_RS21180: ABID97_RS21180 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 4,372,592 to 4,373,659 _RS21180 ABID97_RS21185: ABID97_RS21185 - carbohydrate ABC transporter permease, at 4,373,679 to 4,374,530 _RS21185 ABID97_RS21190: ABID97_RS21190 - sugar ABC transporter permease, at 4,374,527 to 4,375,402 _RS21190 ABID97_RS21195: ABID97_RS21195 - ABC transporter substrate-binding protein, at 4,375,439 to 4,376,824 _RS21195
Group Condition ABID97_RS21175 ABID97_RS21180 ABID97_RS21185 ABID97_RS21190 ABID97_RS21195
carbon source D-Gluconic Acid (C) +0.2 -7.9 -8.6 -4.7 -7.2
carbon source D-Gluconic Acid (C) -0.0 -7.5 -7.4 -4.7 -8.0
carbon source D-Glucuronic Acid (C) -0.1 -2.4 -2.1 -1.2 -2.6
carbon source D-Xylose (C) +0.2 -1.9 -2.4 -2.3 -1.8
carbon source D-Xylose (C) +0.2 -1.9 -2.3 -1.8 -2.2
carbon source D-Glucose (C) -0.8 -1.8 -2.0 -1.3 -1.8
carbon source D-Glucose (C) -0.1 -1.4 -1.1 -1.3 -1.4
carbon source D-Mannose (C) -0.1 -1.2 -1.4 -1.4 -1.2
carbon source D-Mannose (C) -0.3 -1.1 -1.2 -1.3 -1.1
carbon source 4-Hydroxybenzoic Acid (C) -1.0 -0.8 -0.5 -0.2 -0.2
carbon source D-Lactate (C) -0.4 -0.5 -0.5 -0.3 -0.3
carbon source L-Phenylalanine (C) -0.5 -0.5 -0.5 -0.2 -0.2
carbon source Gly-Glu (C) -0.2 -0.3 -0.6 -0.4 -0.2
carbon source L-Lactate (C) -0.8 -0.2 -0.2 -0.3 -0.2
carbon source L-Fucose (C) -0.5 -0.2 -0.3 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.1 +0.1 -0.8 -0.0
carbon source Fumarate (C) -0.4 -0.5 -0.1 +0.3 -0.3
carbon source D-Arabinose (C) -0.4 -0.2 -0.2 +0.3 +0.1
carbon source Ethanol (C) +0.2 +0.1 +0.1 -0.7 +0.2
carbon source L-Alanine (C) +0.2 -0.1 +0.1 -0.5 +0.6
carbon source D,L-Malic Acid (C) -0.5 +0.2 +0.2 +0.3 +0.4
carbon source L-Threonine (C) +0.5 -0.1 +0.1 +0.3 +0.3
phage V2_100 +1.2 +0.2 -0.2 -0.2 +0.2
carbon source Formate (C) +0.5 +0.3 +0.0 +0.2 +0.2
carbon source Tween 20 (C) +0.4 +0.4 +0.1 +0.1 +0.4
carbon source D-Serine (C) +0.4 +0.3 +0.0 +0.3 +0.3
carbon source L-Tryptophan (C) +0.2 +0.4 +0.2 +0.5 +0.2
phage V1_1 +0.2 +0.3 +0.1 +0.4 +0.5
carbon source L-tyrosine (C) +0.5 +0.6 -0.1 +0.2 +0.6
carbon source Glucuronamide (C) -0.1 +0.4 +0.7 +0.7 +0.5
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