Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 111 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
ABID97_RS21095 and ABID97_RS21100 are separated by 100 nucleotides
ABID97_RS21100 and ABID97_RS21105 overlap by 4 nucleotides
ABID97_RS21105 and ABID97_RS21110 are separated by 31 nucleotides
ABID97_RS21110 and ABID97_RS21115 are separated by 16 nucleotides
ABID97_RS21095: ABID97_RS21095 - tripartite tricarboxylate transporter substrate binding protein, at 4,355,474 to 4,356,466
_RS21095
ABID97_RS21100: ABID97_RS21100 - GntR family transcriptional regulator, at 4,356,567 to 4,357,322
_RS21100
ABID97_RS21105: ABID97_RS21105 - transporter substrate-binding domain-containing protein, at 4,357,319 to 4,358,119
_RS21105
ABID97_RS21110: ABID97_RS21110 - amino acid ABC transporter permease, at 4,358,151 to 4,358,807
_RS21110
ABID97_RS21115: ABID97_RS21115 - amino acid ABC transporter permease, at 4,358,824 to 4,359,477
_RS21115
Group
Condition
ABID97
_RS21095
ABID97
_RS21100
ABID97
_RS21105
ABID97
_RS21110
ABID97
_RS21115
carbon source
L-Alanine (C)
-0.0
-3.1
-0.4
-0.2
+0.0
plant outgrowth control
Plant outgrowth control
+0.0
-1.2
-0.1
-0.1
-0.6
carbon source
Ethanol (C)
+0.1
-1.3
-0.0
-0.1
-0.1
carbon source
Tween 20 (C)
+0.2
-1.2
+0.0
+0.1
-0.2
carbon source
Fumarate (C)
-0.1
-0.1
+0.1
-0.1
-0.8
carbon source
propionate (C)
+0.2
-0.5
-0.3
+0.4
-0.8
carbon source
L-Arabinose (C)
+0.0
-1.2
-0.1
+0.0
+0.2
carbon source
propionate (C)
+0.0
+0.2
-0.4
-0.0
-0.7
carbon source
L-Malic (C)
+0.1
-0.8
+0.1
+0.1
-0.4
carbon source
D-Fructose (C)
-0.1
+0.5
-0.1
-0.5
-0.4
phage
V2_100
+0.2
+0.1
+0.2
-0.4
-0.6
carbon source
D,L-Malic Acid (C)
-0.2
+0.7
-0.0
+0.1
-0.8
carbon source
Fumarate (C)
+0.0
+0.6
+0.1
-0.2
-0.5
carbon source
Formate (C)
-0.5
+0.2
-0.2
+0.1
+0.5
carbon source
Gly-Glu (C)
-0.1
+0.9
+0.0
-0.2
-0.2
carbon source
L-Malic (C)
+0.1
+0.8
-0.1
-0.3
+0.0
carbon source
4-Hydroxybenzoic Acid (C)
+0.2
+1.5
-0.4
-0.3
-0.5
carbon source
Gly-Glu (C)
+0.0
+0.7
-0.3
-0.0
+0.2
carbon source
D-Lactate (C)
+0.3
+0.8
-0.2
-0.2
-0.1
carbon source
D-Mannose (C)
-0.1
+0.9
+0.0
+0.1
-0.3
phage
V1_10
-0.2
+1.0
+0.1
-0.1
-0.0
carbon source
2-Deoxy-D-Ribose (C)
-0.2
+0.9
+0.3
-0.2
+0.0
carbon source
D,L-Lactate (C)
-0.0
+0.9
-0.1
-0.2
+0.2
carbon source
Adenine (C)
-0.1
+0.8
+0.2
-0.2
+0.2
carbon source
L-Glutamine (C)
-0.0
+0.8
+0.3
-0.2
+0.0
carbon source
L-Histidine (C)
-0.1
+0.8
-0.1
-0.1
+0.5
carbon source
a-Ketoglutaric (C)
+0.2
+1.3
+0.1
-0.0
-0.4
carbon source
L-Fucose (C)
+0.0
+1.1
-0.0
+0.2
-0.1
carbon source
a-Ketoglutaric (C)
+0.0
+1.0
+0.0
+0.3
-0.0
carbon source
butyrate (C)
-0.3
+1.1
+0.1
-0.1
+0.4
remove
ABID97_RS21095
plot
remove
ABID97_RS21100
plot
remove
ABID97_RS21105
remove
ABID97_RS21110
plot
remove
ABID97_RS21115
plot