Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20925 and ABID97_RS20930 are separated by 202 nucleotidesABID97_RS20930 and ABID97_RS20935 are separated by 11 nucleotidesABID97_RS20935 and ABID97_RS20940 are separated by 242 nucleotidesABID97_RS20940 and ABID97_RS20945 are separated by 114 nucleotides ABID97_RS20925: ABID97_RS20925 - PaaI family thioesterase, at 4,327,732 to 4,328,172 _RS20925 ABID97_RS20930: ABID97_RS20930 - DUF4139 domain-containing protein, at 4,328,375 to 4,330,021 _RS20930 ABID97_RS20935: ABID97_RS20935 - ribosome biogenesis GTPase YlqF, at 4,330,033 to 4,331,007 _RS20935 ABID97_RS20940: ABID97_RS20940 - CBS domain-containing protein, at 4,331,250 to 4,331,678 _RS20940 ABID97_RS20945: ABID97_RS20945 - HPF/RaiA family ribosome-associated protein, at 4,331,793 to 4,332,152 _RS20945
Group Condition ABID97_RS20925 ABID97_RS20930 ABID97_RS20935 ABID97_RS20940 ABID97_RS20945
carbon source D-Serine (C) -0.2 +0.1 N.D. -2.2 N.D.
r2a outgrowth control R2A outgrowth control +0.1 -0.1 N.D. -2.1 N.D.
carbon source Fumarate (C) -0.1 +0.1 N.D. -1.9 N.D.
carbon source Glucuronamide (C) -0.3 -0.0 N.D. -1.5 N.D.
carbon source D-Serine (C) -0.2 +0.2 N.D. -1.5 N.D.
carbon source D,L-Lactate (C) +0.1 +0.1 N.D. -1.6 N.D.
carbon source L-Proline (C) -0.4 +0.0 N.D. -0.9 N.D.
plant outgrowth control Plant outgrowth control -0.0 -0.1 N.D. -1.1 N.D.
carbon source L-Alanine (C) -0.4 +0.1 N.D. -0.8 N.D.
r2a outgrowth control R2A outgrowth control +0.5 -0.1 N.D. -1.3 N.D.
carbon source L-Fucose (C) -0.4 +0.1 N.D. -0.6 N.D.
carbon source a-Ketoglutaric (C) -0.3 +0.1 N.D. -0.7 N.D.
carbon source Gly-Glu (C) -0.2 +0.1 N.D. -0.8 N.D.
carbon source Fumarate (C) -0.1 +0.1 N.D. -0.9 N.D.
carbon source Formate (C) -0.3 +0.3 N.D. -0.8 N.D.
carbon source Glycerol (C) +0.2 +0.1 N.D. -0.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.0 N.D. -0.9 N.D.
carbon source L-Lactate (C) -0.5 +0.4 N.D. -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 N.D. -0.7 N.D.
carbon source D-Glucose (C) -0.3 -0.4 N.D. +0.6 N.D.
carbon source L-tyrosine (C) -0.4 -0.1 N.D. +0.7 N.D.
carbon source D-Glucuronic Acid (C) -0.5 +0.0 N.D. +0.8 N.D.
carbon source L-Glutamine (C) -0.5 +0.0 N.D. +0.9 N.D.
carbon source acetate (C) -0.3 +0.2 N.D. +0.6 N.D.
carbon source butyrate (C) -0.4 -0.0 N.D. +1.1 N.D.
carbon source L-Threonine (C) -0.2 +0.1 N.D. +0.8 N.D.
control NP +0.2 -0.1 N.D. +0.8 N.D.
carbon source L-Histidine (C) -0.2 +0.0 N.D. +1.1 N.D.
carbon source D,L-Malic Acid (C) +0.1 +0.1 N.D. +0.9 N.D.
carbon source L-Phenylalanine (C) -0.1 +0.2 N.D. +1.0 N.D.
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ABID97_RS20925
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ABID97_RS20945
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