Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20825 and ABID97_RS20830 are separated by 141 nucleotidesABID97_RS20830 and ABID97_RS20835 are separated by 9 nucleotidesABID97_RS20835 and ABID97_RS20840 are separated by 169 nucleotidesABID97_RS20840 and ABID97_RS20845 are separated by 38 nucleotides ABID97_RS20825: ABID97_RS20825 - alpha/beta hydrolase, at 4,303,537 to 4,304,343 _RS20825 ABID97_RS20830: ABID97_RS20830 - response regulator transcription factor, at 4,304,485 to 4,305,186 _RS20830 ABID97_RS20835: ABID97_RS20835 - undecaprenyl-diphosphate phosphatase, at 4,305,196 to 4,306,020 _RS20835 ABID97_RS20840: ABID97_RS20840 - SPW repeat protein, at 4,306,190 to 4,306,555 _RS20840 ABID97_RS20845: ABID97_RS20845 - efflux transporter outer membrane subunit, at 4,306,594 to 4,308,045 _RS20845
Group Condition ABID97_RS20825 ABID97_RS20830 ABID97_RS20835 ABID97_RS20840 ABID97_RS20845
carbon source D-Glucuronic Acid (C) -0.1 -0.5 N.D. N.D. -0.5
carbon source D-Gluconic Acid (C) -0.2 -0.5 N.D. N.D. -0.2
plant outgrowth control Plant outgrowth control -0.2 -0.3 N.D. N.D. -0.3
carbon source a-Ketoglutaric (C) -0.2 -0.1 N.D. N.D. -0.4
r2a outgrowth control R2A outgrowth control -0.2 -0.4 N.D. N.D. -0.0
carbon source D-Arabinose (C) -0.2 -0.1 N.D. N.D. -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.4 N.D. N.D. -0.0
carbon source L-Tryptophan (C) +0.1 -0.1 N.D. N.D. -0.4
carbon source D,L-Malic Acid (C) -0.3 +0.2 N.D. N.D. -0.3
carbon source Ethanol (C) -0.1 +0.1 N.D. N.D. -0.4
carbon source Formate (C) -0.1 +0.2 N.D. N.D. -0.5
carbon source L-tyrosine (C) +0.2 -0.5 N.D. N.D. +0.1
carbon source L-Alanine (C) -0.2 -0.1 N.D. N.D. +0.2
carbon source Tween 20 (C) +0.2 -0.1 N.D. N.D. -0.2
carbon source Glycerol (C) +0.1 +0.2 N.D. N.D. -0.3
carbon source L-Histidine (C) -0.4 +0.3 N.D. N.D. +0.2
carbon source D,L-Malic Acid (C) +0.2 +0.2 N.D. N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.1 N.D. N.D. +0.4
carbon source Gly-Glu (C) -0.2 +0.3 N.D. N.D. +0.0
phage V2_100 +0.3 -0.3 N.D. N.D. +0.1
carbon source succinate (C) -0.2 +0.2 N.D. N.D. +0.3
carbon source Glucuronamide (C) +0.4 -0.3 N.D. N.D. +0.1
carbon source L-Malic (C) -0.2 +0.1 N.D. N.D. +0.3
carbon source D-Serine (C) -0.2 +0.4 N.D. N.D. +0.1
carbon source D-Xylose (C) +0.3 -0.1 N.D. N.D. +0.2
phage V2_10 +0.3 +0.2 N.D. N.D. -0.0
phage V1_10 +0.4 +0.3 N.D. N.D. -0.1
phage V2_1 +0.2 +0.2 N.D. N.D. +0.1
carbon source casaminos (C) -0.1 +0.7 N.D. N.D. -0.0
carbon source L-Alanine (C) -0.0 +0.7 N.D. N.D. +0.3
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