Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20805 and ABID97_RS20810 are separated by 31 nucleotidesABID97_RS20810 and ABID97_RS20815 are separated by 165 nucleotidesABID97_RS20815 and ABID97_RS20820 are separated by 28 nucleotidesABID97_RS20820 and ABID97_RS20825 are separated by 18 nucleotides ABID97_RS20805: ABID97_RS20805 - magnesium/cobalt transporter CorA, at 4,298,255 to 4,299,232 _RS20805 ABID97_RS20810: ABID97_RS20810 - hypothetical protein, at 4,299,264 to 4,299,887 _RS20810 ABID97_RS20815: ABID97_RS20815 - DNA mismatch repair protein MutS, at 4,300,053 to 4,302,650 _RS20815 ABID97_RS20820: ABID97_RS20820 - proteasome-type protease, at 4,302,679 to 4,303,518 _RS20820 ABID97_RS20825: ABID97_RS20825 - alpha/beta hydrolase, at 4,303,537 to 4,304,343 _RS20825
Group Condition ABID97_RS20805 ABID97_RS20810 ABID97_RS20815 ABID97_RS20820 ABID97_RS20825
carbon source D-Galactose (C) -0.2 -0.9 +0.1 +0.1 -0.1
carbon source D-Arabinose (C) -0.1 -0.4 +0.1 -0.3 -0.2
carbon source D-Serine (C) -0.2 -0.3 +0.3 -0.5 -0.2
carbon source Glycolic Acid (C) -0.2 +0.3 -0.2 -0.2 -0.3
carbon source L-Fucose (C) -0.2 -0.9 +0.6 +0.1 -0.1
carbon source L-Phenylalanine (C) -0.1 -0.5 +0.1 -0.4 +0.2
carbon source L-Histidine (C) -0.2 -0.2 +0.2 +0.2 -0.4
carbon source Ethanol (C) -0.3 -0.4 +0.2 +0.2 -0.1
carbon source L-Fucose (C) -0.5 -0.2 +0.4 +0.1 -0.1
phage V2_10 +0.1 -0.5 +0.3 -0.2 +0.1
carbon source L-Histidine (C) -0.1 +0.3 +0.4 -0.4 -0.3
carbon source Glucuronamide (C) -0.3 +0.1 +0.3 +0.2 -0.3
carbon source pyruvate (C) -0.1 -0.3 +0.2 +0.4 -0.2
carbon source L-Threonine (C) -0.3 +0.3 +0.4 -0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.4 +0.5 -1.2 +0.2
carbon source Tween 20 (C) -0.2 +0.4 +0.0 -0.3 +0.2
carbon source D-Galactose (C) +0.0 -0.4 +0.3 +0.3 -0.2
carbon source Formate (C) -0.3 +0.3 +0.4 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.6 +0.3 -0.2 -0.3
plant outgrowth control Plant outgrowth control -0.1 +0.3 +0.2 +0.3 -0.2
carbon source Ethanol (C) -0.3 +0.5 +0.1 +0.2 -0.1
phage V1_10 +0.2 -0.3 +0.3 -0.1 +0.4
phage V2_1 +0.3 +0.4 +0.0 -0.3 +0.2
phage V2_100 +0.0 -0.6 +0.7 +0.2 +0.3
carbon source a-Ketoglutaric (C) -0.2 -0.1 +1.1 +0.2 -0.2
carbon source D-Gluconic Acid (C) +0.0 +0.2 +0.4 +0.4 -0.2
carbon source L-tyrosine (C) -0.2 +0.5 +0.8 -0.4 +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.4 +0.6 +0.2 -0.0
carbon source L-Alanine (C) -0.1 +0.8 +1.6 -0.2 -0.2
carbon source L-Alanine (C) +0.1 -0.4 +2.8 +0.3 -0.0
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ABID97_RS20805
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ABID97_RS20810
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ABID97_RS20825
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