Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20790 and ABID97_RS20795 are separated by 100 nucleotidesABID97_RS20795 and ABID97_RS20800 are separated by 15 nucleotidesABID97_RS20800 and ABID97_RS20805 are separated by 12 nucleotidesABID97_RS20805 and ABID97_RS20810 are separated by 31 nucleotides ABID97_RS20790: ABID97_RS20790 - 2OG-Fe(II) oxygenase, at 4,295,989 to 4,296,669 _RS20790 ABID97_RS20795: ABID97_RS20795 - PadR family transcriptional regulator, at 4,296,770 to 4,297,384 _RS20795 ABID97_RS20800: ABID97_RS20800 - siderophore-interacting protein, at 4,297,400 to 4,298,242 _RS20800 ABID97_RS20805: ABID97_RS20805 - magnesium/cobalt transporter CorA, at 4,298,255 to 4,299,232 _RS20805 ABID97_RS20810: ABID97_RS20810 - hypothetical protein, at 4,299,264 to 4,299,887 _RS20810
Group Condition ABID97_RS20790 ABID97_RS20795 ABID97_RS20800 ABID97_RS20805 ABID97_RS20810
carbon source L-Fucose (C) +0.0 N.D. N.D. -0.2 -0.9
carbon source D-Mannose (C) -0.3 N.D. N.D. -0.0 -0.6
carbon source D-Galactose (C) +0.3 N.D. N.D. -0.2 -0.9
carbon source Ethanol (C) -0.1 N.D. N.D. -0.3 -0.4
carbon source D-Sorbitol (C) -0.3 N.D. N.D. -0.0 -0.4
carbon source D-Arabinose (C) -0.2 N.D. N.D. -0.1 -0.4
carbon source L-Fucose (C) +0.0 N.D. N.D. -0.5 -0.2
carbon source L-Alanine (C) -0.2 N.D. N.D. +0.1 -0.4
carbon source L-Glutamic (C) +0.2 N.D. N.D. -0.2 -0.3
phage V1_1 -0.2 N.D. N.D. +0.2 -0.3
r2a outgrowth control R2A outgrowth control -0.3 N.D. N.D. -0.3 +0.3
phage V2_100 +0.2 N.D. N.D. +0.0 -0.6
carbon source D-Ribose (C) +0.3 N.D. N.D. +0.0 -0.6
carbon source Glycerol (C) -0.3 N.D. N.D. -0.3 +0.3
carbon source L-Threonine (C) -0.3 N.D. N.D. -0.3 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.3 N.D. N.D. -0.3 -0.1
carbon source Ethanol (C) -0.4 N.D. N.D. -0.3 +0.5
carbon source L-Leucine (C) +0.3 N.D. N.D. -0.3 +0.3
carbon source L-tyrosine (C) +0.0 N.D. N.D. -0.2 +0.5
carbon source propionate (C) +0.4 N.D. N.D. +0.1 -0.2
carbon source L-Proline (C) +0.2 N.D. N.D. -0.2 +0.3
carbon source D-Ribose (C) +0.6 N.D. N.D. +0.0 -0.2
carbon source D-Sorbitol (C) +0.2 N.D. N.D. -0.3 +0.6
plant outgrowth control Plant outgrowth control +0.3 N.D. N.D. -0.1 +0.3
carbon source L-Histidine (C) +0.4 N.D. N.D. -0.1 +0.3
carbon source L-Malic (C) +0.5 N.D. N.D. -0.2 +0.4
carbon source L-Alanine (C) +0.0 N.D. N.D. -0.1 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 N.D. N.D. +0.2 +0.3
phage V2_1 +0.2 N.D. N.D. +0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 N.D. N.D. +0.2 +0.4
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ABID97_RS20790
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ABID97_RS20795
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