Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20700 and ABID97_RS20705 are separated by 121 nucleotidesABID97_RS20705 and ABID97_RS20710 are separated by 18 nucleotidesABID97_RS20710 and ABID97_RS20715 are separated by 61 nucleotidesABID97_RS20715 and ABID97_RS20720 are separated by 69 nucleotides ABID97_RS20700: ABID97_RS20700 - ribosome biogenesis factor YjgA, at 4,274,741 to 4,275,397 _RS20700 ABID97_RS20705: ABID97_RS20705 - molybdopterin adenylyltransferase, at 4,275,519 to 4,276,109 _RS20705 ABID97_RS20710: ABID97_RS20710 - cation:proton antiporter, at 4,276,128 to 4,277,399 _RS20710 ABID97_RS20715: ABID97_RS20715 - heavy metal translocating P-type ATPase, at 4,277,461 to 4,279,734 _RS20715 ABID97_RS20720: ABID97_RS20720 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 4,279,804 to 4,280,274 _RS20720
Group Condition ABID97_RS20700 ABID97_RS20705 ABID97_RS20710 ABID97_RS20715 ABID97_RS20720
phage V1_1 N.D. -0.1 N.D. -5.5 -1.9
phage V1_1 N.D. -0.2 N.D. -4.8 -2.0
phage V2_1 N.D. -0.2 N.D. -4.5 -1.7
control NP N.D. +0.1 N.D. -4.5 -2.0
phage V2_1 N.D. -0.2 N.D. -3.4 -2.2
phage V1_10 N.D. -0.2 N.D. -2.4 -2.7
phage V2_10 N.D. -0.3 N.D. -2.9 -1.9
phage V1_10 N.D. -0.2 N.D. -2.5 -2.1
phage V2_10 N.D. -0.0 N.D. -2.8 -1.6
carbon source Adenine (C) N.D. -3.5 N.D. -0.3 +0.2
carbon source Adenine (C) N.D. -2.9 N.D. -0.0 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -2.3 N.D. -0.8 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -2.3 N.D. -0.3 +0.7
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.8 N.D. -0.0 +0.1
carbon source butyrate (C) N.D. -0.8 N.D. -0.6 -0.3
carbon source L-tyrosine (C) N.D. -1.6 N.D. -0.1 -0.0
carbon source butyrate (C) N.D. -0.9 N.D. -0.5 -0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.7 N.D. +0.1 -0.0
carbon source D-Glucuronic Acid (C) N.D. -0.7 N.D. -0.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.3 N.D. -0.3 +0.3
carbon source propionate (C) N.D. -0.8 N.D. -0.1 -0.1
carbon source Ethanol (C) N.D. -0.5 N.D. -0.2 -0.3
carbon source L-Tryptophan (C) N.D. -0.7 N.D. -0.2 -0.1
carbon source a-Ketoglutaric (C) N.D. -0.6 N.D. -0.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 N.D. -0.5 +0.2
carbon source Tween 20 (C) N.D. -0.4 N.D. -0.5 +0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.3 N.D. -0.5 +0.4
carbon source D,L-Malic Acid (C) N.D. -0.7 N.D. +0.0 +0.3
phage V2_100 N.D. -0.2 N.D. +0.4 -0.5
carbon source Formate (C) N.D. +1.0 N.D. -0.2 -0.1
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