Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS20665 and ABID97_RS20670 are separated by 21 nucleotidesABID97_RS20670 and ABID97_RS20675 are separated by 102 nucleotidesABID97_RS20675 and ABID97_RS20680 are separated by 14 nucleotidesABID97_RS20680 and ABID97_RS20685 are separated by 12 nucleotides ABID97_RS20665: ABID97_RS20665 - NUDIX domain-containing protein, at 4,268,533 to 4,269,003 _RS20665 ABID97_RS20670: ABID97_RS20670 - sulfite exporter TauE/SafE family protein, at 4,269,025 to 4,269,783 _RS20670 ABID97_RS20675: ABID97_RS20675 - LysR family transcriptional regulator, at 4,269,886 to 4,270,791 _RS20675 ABID97_RS20680: ABID97_RS20680 - nucleoside 2-deoxyribosyltransferase, at 4,270,806 to 4,271,348 _RS20680 ABID97_RS20685: ABID97_RS20685 - AraC family transcriptional regulator, at 4,271,361 to 4,272,260 _RS20685
Group Condition ABID97_RS20665 ABID97_RS20670 ABID97_RS20675 ABID97_RS20680 ABID97_RS20685
carbon source butyrate (C) -0.6 N.D. -1.0 -0.2 -0.2
carbon source L-Alanine (C) -1.2 N.D. -0.1 -0.2 +0.0
carbon source L-Alanine (C) +0.3 N.D. -0.8 -0.5 -0.5
carbon source L-Glutamic (C) -0.8 N.D. -0.4 -0.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.7 N.D. -0.4 +0.1 -0.3
carbon source Adenine (C) -0.8 N.D. -0.2 -0.3 -0.0
carbon source Glycolic Acid (C) -0.3 N.D. -0.7 +0.0 -0.3
carbon source D-Arabinose (C) -0.6 N.D. -0.5 +0.1 -0.2
carbon source acetate (C) -0.8 N.D. -0.3 +0.1 -0.1
carbon source propionate (C) -0.4 N.D. -0.9 +0.6 -0.3
carbon source L-Glutamine (C) -0.2 N.D. -0.8 +0.2 -0.2
carbon source Ethanol (C) -0.5 N.D. -0.7 +0.3 -0.0
carbon source propionate (C) -0.8 N.D. -0.3 +0.2 +0.1
carbon source D-Glucuronic Acid (C) -0.5 N.D. -0.5 +0.3 -0.2
carbon source L-Asparagine (C) +0.3 N.D. -0.8 -0.2 -0.2
carbon source D-Gluconic Acid (C) -0.9 N.D. -0.2 +0.4 +0.0
phage V2_100 -1.3 N.D. +0.2 +0.3 +0.2
carbon source Formate (C) +0.2 N.D. -0.6 +0.2 -0.4
carbon source D-Galactose (C) -0.5 N.D. -0.5 +0.7 -0.1
carbon source L-Histidine (C) -0.2 N.D. +0.0 +0.4 -0.5
carbon source casaminos (C) +0.6 N.D. -0.4 -0.2 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 N.D. -0.7 -0.1 -0.1
carbon source Tween 20 (C) -0.4 N.D. -0.4 +0.7 -0.1
carbon source L-Phenylalanine (C) -0.5 N.D. -0.3 +0.5 +0.0
carbon source D,L-Malic Acid (C) +0.6 N.D. -0.2 -0.1 -0.3
phage V2_10 +0.6 N.D. -0.4 -0.2 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. -0.3 +0.7 +0.2
phage V2_10 +0.5 N.D. -0.5 +0.3 -0.1
carbon source Tween 20 (C) +0.7 N.D. -0.2 +0.2 +0.1
carbon source L-Phenylalanine (C) +0.7 N.D. +0.0 +0.5 +0.1
remove
ABID97_RS20665
plot		 remove
ABID97_RS20670
plot		 remove
ABID97_RS20675		 remove
ABID97_RS20680
plot		 remove
ABID97_RS20685
plot