Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20570 and ABID97_RS20575 are separated by 141 nucleotidesABID97_RS20575 and ABID97_RS20580 are separated by 260 nucleotidesABID97_RS20580 and ABID97_RS20585 are separated by 17 nucleotidesABID97_RS20585 and ABID97_RS20590 are separated by 75 nucleotides ABID97_RS20570: ABID97_RS20570 - ABC transporter ATP-binding protein, at 4,245,929 to 4,246,738 _RS20570 ABID97_RS20575: ABID97_RS20575 - type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein, at 4,246,880 to 4,248,169 _RS20575 ABID97_RS20580: ABID97_RS20580 - MFS transporter, at 4,248,430 to 4,249,698 _RS20580 ABID97_RS20585: ABID97_RS20585 - bifunctional protein-serine/threonine kinase/phosphatase, at 4,249,716 to 4,251,416 _RS20585 ABID97_RS20590: ABID97_RS20590 - nitrite reductase large subunit NirB, at 4,251,492 to 4,253,936 _RS20590
Group Condition ABID97_RS20570 ABID97_RS20575 ABID97_RS20580 ABID97_RS20585 ABID97_RS20590
carbon source L-tyrosine (C) -1.0 N.D. -0.1 -0.6 N.D.
carbon source L-Threonine (C) -0.5 N.D. -0.4 -0.4 N.D.
phage V2_100 -0.6 N.D. -0.3 -0.3 N.D.
carbon source Ethanol (C) -0.2 N.D. -0.2 -0.6 N.D.
carbon source acetate (C) -0.5 N.D. -0.4 -0.2 N.D.
carbon source succinate (C) -0.4 N.D. -0.3 -0.3 N.D.
carbon source acetate (C) -0.3 N.D. -0.3 -0.3 N.D.
carbon source L-Glutamine (C) -0.2 N.D. -0.4 -0.3 N.D.
carbon source L-tyrosine (C) -0.3 N.D. -0.2 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.4 N.D. +0.2 -0.5 N.D.
carbon source L-Arabinose (C) -0.5 N.D. -0.2 -0.0 N.D.
carbon source L-Histidine (C) -0.4 N.D. +0.1 -0.4 N.D.
carbon source L-Arabinose (C) -0.1 N.D. -0.0 -0.5 N.D.
carbon source Glycerol (C) -0.2 N.D. +0.1 -0.5 N.D.
carbon source Glucuronamide (C) -0.4 N.D. +0.0 -0.3 N.D.
carbon source D-Glucuronic Acid (C) -0.1 N.D. +0.2 -0.6 N.D.
carbon source L-Asparagine (C) -0.3 N.D. +0.2 -0.4 N.D.
carbon source D-Arabinose (C) -0.4 N.D. -0.4 +0.3 N.D.
carbon source D,L-Malic Acid (C) -0.6 N.D. +0.1 +0.1 N.D.
carbon source a-Ketoglutaric (C) -0.4 N.D. +0.3 -0.2 N.D.
carbon source L-Alanine (C) -0.3 N.D. +0.4 -0.4 N.D.
carbon source D-Serine (C) -0.1 N.D. -0.3 +0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. -0.1 +0.3 N.D.
carbon source L-Phenylalanine (C) +0.1 N.D. +0.2 -0.3 N.D.
carbon source L-Malic (C) -0.4 N.D. +0.4 +0.1 N.D.
phage V1_10 +0.1 N.D. +0.4 -0.3 N.D.
carbon source butyrate (C) -0.2 N.D. -0.2 +0.7 N.D.
carbon source D-Arabinose (C) -0.2 N.D. -0.2 +0.7 N.D.
carbon source butyrate (C) -0.1 N.D. -0.4 +0.9 N.D.
carbon source propionate (C) -0.3 N.D. +0.1 +1.7 N.D.
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ABID97_RS20575
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ABID97_RS20590
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