Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20545 and ABID97_RS20550 overlap by 65 nucleotidesABID97_RS20550 and ABID97_RS20555 are separated by 115 nucleotidesABID97_RS20555 and ABID97_RS20560 are separated by 343 nucleotidesABID97_RS20560 and ABID97_RS20565 are separated by 13 nucleotides ABID97_RS20545: ABID97_RS20545 - alpha/beta hydrolase-fold protein, at 4,240,188 to 4,240,946 _RS20545 ABID97_RS20550: ABID97_RS20550 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 4,240,882 to 4,241,943 _RS20550 ABID97_RS20555: ABID97_RS20555 - nitrate- and nitrite sensing domain-containing protein, at 4,242,059 to 4,243,339 _RS20555 ABID97_RS20560: ABID97_RS20560 - CmpA/NrtA family ABC transporter substrate-binding protein, at 4,243,683 to 4,244,927 _RS20560 ABID97_RS20565: ABID97_RS20565 - nitrate ABC transporter permease, at 4,244,941 to 4,245,873 _RS20565
Group Condition ABID97_RS20545 ABID97_RS20550 ABID97_RS20555 ABID97_RS20560 ABID97_RS20565
carbon source L-Arabinose (C) -0.2 N.D. N.D. -0.2 -0.4
phage V2_100 -0.0 N.D. N.D. -0.1 -0.6
carbon source butyrate (C) -0.1 N.D. N.D. -0.3 -0.4
carbon source propionate (C) -0.3 N.D. N.D. -0.1 -0.3
carbon source D-Mannose (C) -0.3 N.D. N.D. -0.0 -0.4
carbon source Glucuronamide (C) -0.3 N.D. N.D. -0.3 -0.1
carbon source D,L-Malic Acid (C) +0.0 N.D. N.D. -0.2 -0.4
carbon source L-Malic (C) -0.2 N.D. N.D. -0.4 +0.0
carbon source D-Glucuronic Acid (C) -0.3 N.D. N.D. +0.2 -0.5
carbon source L-Fucose (C) +0.3 N.D. N.D. -0.4 -0.3
r2a outgrowth control R2A outgrowth control +0.0 N.D. N.D. +0.1 -0.5
carbon source L-tyrosine (C) +0.2 N.D. N.D. -0.4 -0.1
carbon source Fumarate (C) +0.3 N.D. N.D. -0.5 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 N.D. N.D. -0.3 -0.0
carbon source L-Lactate (C) -0.2 N.D. N.D. -0.2 +0.4
carbon source pyruvate (C) -0.2 N.D. N.D. -0.2 +0.5
carbon source D-Glucose (C) +0.1 N.D. N.D. -0.3 +0.3
carbon source L-Histidine (C) +0.4 N.D. N.D. -0.2 -0.0
carbon source D-Galactose (C) +0.3 N.D. N.D. -0.3 +0.2
phage V2_1 -0.3 N.D. N.D. +0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.1 N.D. N.D. -0.3 +0.3
carbon source Glycerol (C) +0.2 N.D. N.D. -0.4 +0.3
carbon source succinate (C) +0.0 N.D. N.D. -0.3 +0.4
carbon source D-Arabinose (C) +0.4 N.D. N.D. -0.2 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 N.D. N.D. +0.1 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 N.D. N.D. +0.3 -0.2
carbon source butyrate (C) +0.2 N.D. N.D. -0.2 +0.2
carbon source L-Proline (C) +0.3 N.D. N.D. -0.1 +0.2
carbon source L-Arabinose (C) +0.2 N.D. N.D. -0.2 +0.4
carbon source 4-Hydroxybenzoic Acid (C) +0.3 N.D. N.D. +0.1 +0.2
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