Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20500 and ABID97_RS20505 are separated by 117 nucleotidesABID97_RS20505 and ABID97_RS20510 are separated by 38 nucleotidesABID97_RS20510 and ABID97_RS20515 overlap by 7 nucleotidesABID97_RS20515 and ABID97_RS20520 are separated by 94 nucleotides ABID97_RS20500: ABID97_RS20500 - tRNA-Leu, at 4,231,604 to 4,231,688 _RS20500 ABID97_RS20505: ABID97_RS20505 - preprotein translocase subunit SecG, at 4,231,806 to 4,232,222 _RS20505 ABID97_RS20510: ABID97_RS20510 - triose-phosphate isomerase, at 4,232,261 to 4,233,046 _RS20510 ABID97_RS20515: ABID97_RS20515 - NAD(P)H-quinone oxidoreductase, at 4,233,040 to 4,234,038 _RS20515 ABID97_RS20520: ABID97_RS20520 - polyribonucleotide nucleotidyltransferase, at 4,234,133 to 4,236,457 _RS20520
Group Condition ABID97_RS20500 ABID97_RS20505 ABID97_RS20510 ABID97_RS20515 ABID97_RS20520
carbon source D-Arabinose (C) N.D. N.D. N.D. -0.6 -2.5
carbon source D-Xylose (C) N.D. N.D. N.D. -0.8 -1.8
carbon source Glycerol (C) N.D. N.D. N.D. -0.7 -1.9
carbon source L-tyrosine (C) N.D. N.D. N.D. +0.2 -2.8
carbon source a-Ketoglutaric (C) N.D. N.D. N.D. +0.1 -2.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. -0.1 -2.1
carbon source L-Fucose (C) N.D. N.D. N.D. +0.1 -2.3
carbon source casaminos (C) N.D. N.D. N.D. +0.1 -2.2
r2a outgrowth control R2A outgrowth control N.D. N.D. N.D. +0.3 -2.4
carbon source D-Gluconic Acid (C) N.D. N.D. N.D. -0.1 -1.8
carbon source pyruvate (C) N.D. N.D. N.D. +0.4 -2.3
carbon source L-Lactate (C) N.D. N.D. N.D. +0.0 -1.9
carbon source a-Ketoglutaric (C) N.D. N.D. N.D. +0.2 -2.0
carbon source Gly-Glu (C) N.D. N.D. N.D. -1.2 -0.5
carbon source L-Lactate (C) N.D. N.D. N.D. +0.1 -1.9
carbon source L-Glutamine (C) N.D. N.D. N.D. +0.2 -1.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. +0.7 -1.9
carbon source L-Arabinose (C) N.D. N.D. N.D. +0.4 -1.5
carbon source L-Fucose (C) N.D. N.D. N.D. +0.7 -1.8
carbon source D,L-Lactate (C) N.D. N.D. N.D. +0.4 -1.5
carbon source D-Sorbitol (C) N.D. N.D. N.D. +0.4 -1.4
carbon source D-Glucuronic Acid (C) N.D. N.D. N.D. -1.2 +0.7
carbon source pyruvate (C) N.D. N.D. N.D. +0.7 -1.1
carbon source L-Threonine (C) N.D. N.D. N.D. +0.8 -1.0
carbon source L-Malic (C) N.D. N.D. N.D. +0.9 -1.0
carbon source L-tyrosine (C) N.D. N.D. N.D. +1.1 -1.1
phage V2_10 N.D. N.D. N.D. -1.0 +1.0
carbon source L-Phenylalanine (C) N.D. N.D. N.D. +1.3 -1.2
phage V2_10 N.D. N.D. N.D. -1.0 +1.3
phage V2_100 N.D. N.D. N.D. +0.2 +3.9
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ABID97_RS20500
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