Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20315 and ABID97_RS20320 are separated by 42 nucleotidesABID97_RS20320 and ABID97_RS20325 overlap by 4 nucleotidesABID97_RS20325 and ABID97_RS20330 are separated by 1 nucleotidesABID97_RS20330 and ABID97_RS20335 are separated by 9 nucleotides ABID97_RS20315: ABID97_RS20315 - alpha/beta fold hydrolase, at 4,193,010 to 4,194,008 _RS20315 ABID97_RS20320: ABID97_RS20320 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 4,194,051 to 4,195,037 _RS20320 ABID97_RS20325: ABID97_RS20325 - ABC transporter ATP-binding protein, at 4,195,034 to 4,195,684 _RS20325 ABID97_RS20330: ABID97_RS20330 - threo-3-hydroxy-L-aspartate ammonia-lyase, at 4,195,686 to 4,196,642 _RS20330 ABID97_RS20335: ABID97_RS20335 - hypothetical protein, at 4,196,652 to 4,196,855 _RS20335
Group Condition ABID97_RS20315 ABID97_RS20320 ABID97_RS20325 ABID97_RS20330 ABID97_RS20335
carbon source L-Proline (C) -0.1 N.D. N.D. -0.2 -1.2
carbon source D-Lactate (C) -0.2 N.D. N.D. -0.4 -0.4
carbon source L-Alanine (C) +0.1 N.D. N.D. +0.0 -1.2
carbon source Gly-Glu (C) -0.6 N.D. N.D. -0.6 +0.2
carbon source L-Phenylalanine (C) +0.1 N.D. N.D. -0.4 -0.5
carbon source D-Mannose (C) +0.3 N.D. N.D. -0.2 -0.8
r2a outgrowth control R2A outgrowth control +0.3 N.D. N.D. -0.2 -0.5
carbon source D-Glucose (C) -0.3 N.D. N.D. -0.4 +0.5
phage V2_100 +0.8 N.D. N.D. -0.0 -1.0
carbon source D-Ribose (C) +0.1 N.D. N.D. -0.6 +0.3
plant outgrowth control Plant outgrowth control +0.1 N.D. N.D. -0.6 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 N.D. N.D. -0.4 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 N.D. N.D. -0.5 +0.1
carbon source D-Glucuronic Acid (C) +0.1 N.D. N.D. -0.3 +0.6
carbon source Glucuronamide (C) +0.2 N.D. N.D. -0.3 +0.6
carbon source L-tyrosine (C) +0.1 N.D. N.D. -0.3 +0.7
phage V1_10 +0.2 N.D. N.D. -0.3 +0.7
carbon source L-Fucose (C) +0.5 N.D. N.D. -0.3 +0.4
plant outgrowth control Plant outgrowth control +0.3 N.D. N.D. -0.2 +0.6
carbon source propionate (C) +1.5 N.D. N.D. -0.1 -0.5
carbon source L-Tryptophan (C) +0.4 N.D. N.D. -0.1 +0.7
carbon source L-Arabinose (C) +0.2 N.D. N.D. +0.0 +0.7
carbon source L-Histidine (C) +0.3 N.D. N.D. -0.2 +0.9
carbon source Glycolic Acid (C) +0.0 N.D. N.D. +0.2 +0.8
carbon source D-Serine (C) +0.4 N.D. N.D. +0.2 +0.6
carbon source L-Threonine (C) +0.4 N.D. N.D. -0.1 +0.8
carbon source D-Ribose (C) +0.5 N.D. N.D. +0.2 +0.5
carbon source Glycolic Acid (C) +0.3 N.D. N.D. +0.3 +0.6
carbon source L-Glutamine (C) +0.2 N.D. N.D. +0.4 +0.9
carbon source propionate (C) +0.5 N.D. N.D. +0.4 +0.6
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ABID97_RS20315
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ABID97_RS20320
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ABID97_RS20335
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