Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20270 and ABID97_RS20275 are separated by 101 nucleotidesABID97_RS20275 and ABID97_RS20280 are separated by 57 nucleotidesABID97_RS20280 and ABID97_RS20285 are separated by 384 nucleotidesABID97_RS20285 and ABID97_RS20290 overlap by 15 nucleotides ABID97_RS20270: ABID97_RS20270 - tripartite tricarboxylate transporter substrate binding protein BugE, at 4,183,832 to 4,184,806 _RS20270 ABID97_RS20275: ABID97_RS20275 - AEC family transporter, at 4,184,908 to 4,185,825 _RS20275 ABID97_RS20280: ABID97_RS20280 - hypothetical protein, at 4,185,883 to 4,186,125 _RS20280 ABID97_RS20285: ABID97_RS20285 - tRNA epoxyqueuosine(34) reductase QueG, at 4,186,510 to 4,187,616 _RS20285 ABID97_RS20290: ABID97_RS20290 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 4,187,602 to 4,188,111 _RS20290
Group Condition ABID97_RS20270 ABID97_RS20275 ABID97_RS20280 ABID97_RS20285 ABID97_RS20290
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.1 -0.4 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.8 -0.4 -0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.3 -0.7 -0.7 N.D.
plant outgrowth control Plant outgrowth control -0.2 -0.7 -0.5 -0.4 N.D.
phage V1_1 -0.4 -0.6 -0.2 -0.4 N.D.
phage V2_1 -0.1 -0.9 -0.1 -0.4 N.D.
plant outgrowth control Plant outgrowth control -0.3 -0.6 -0.2 -0.5 N.D.
phage V1_10 -0.4 -0.4 -0.4 -0.4 N.D.
phage V2_1 -0.5 -0.4 -0.1 -0.4 N.D.
carbon source Gly-Glu (C) +0.3 -0.5 -0.6 -0.4 N.D.
carbon source Glucuronamide (C) +0.5 +0.5 -0.4 +0.5 N.D.
carbon source L-Histidine (C) +0.7 +0.4 -0.1 +0.5 N.D.
carbon source L-Asparagine (C) +0.7 +0.4 +0.2 +0.4 N.D.
carbon source D,L-Lactate (C) +0.3 +0.5 +0.5 +0.3 N.D.
carbon source D-Serine (C) +0.6 +0.4 +0.1 +0.5 N.D.
carbon source D,L-Lactate (C) +0.5 +0.5 +0.2 +0.4 N.D.
carbon source Glycolic Acid (C) +0.4 +0.3 +0.4 +0.5 N.D.
carbon source D-Gluconic Acid (C) +0.6 +0.5 +0.2 +0.4 N.D.
carbon source Ethanol (C) +0.6 +0.3 +0.3 +0.4 N.D.
carbon source acetate (C) +0.5 +0.5 +0.5 +0.3 N.D.
carbon source L-Arabinose (C) +0.6 +0.4 +0.2 +0.5 N.D.
carbon source L-tyrosine (C) +0.7 +0.2 +0.4 +0.4 N.D.
carbon source D-Ribose (C) +0.6 +0.3 +0.4 +0.4 N.D.
carbon source L-Malic (C) +0.5 +0.5 +0.3 +0.5 N.D.
carbon source a-Ketoglutaric (C) +0.5 +0.5 +0.5 +0.3 N.D.
carbon source Formate (C) +0.5 +0.4 +0.6 +0.3 N.D.
carbon source L-Arabinose (C) +0.4 +0.4 +0.5 +0.5 N.D.
carbon source Ethanol (C) +0.5 +0.5 +0.3 +0.5 N.D.
carbon source D-Serine (C) +0.5 +0.6 +0.6 +0.4 N.D.
carbon source L-Tryptophan (C) +0.7 +0.6 +0.4 +0.4 N.D.
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ABID97_RS20270
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ABID97_RS20275
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ABID97_RS20285
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ABID97_RS20290
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