Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS20210 and ABID97_RS20215 overlap by 1 nucleotidesABID97_RS20215 and ABID97_RS20220 are separated by 12 nucleotidesABID97_RS20220 and ABID97_RS20225 are separated by 34 nucleotidesABID97_RS20225 and ABID97_RS20230 are separated by 39 nucleotides ABID97_RS20210: ABID97_RS20210 - ATP-binding protein, at 4,173,602 to 4,174,300 _RS20210 ABID97_RS20215: ABID97_RS20215 - hypothetical protein, at 4,174,300 to 4,175,277 _RS20215 ABID97_RS20220: ABID97_RS20220 - Hsp33 family molecular chaperone HslO, at 4,175,290 to 4,176,297 _RS20220 ABID97_RS20225: ABID97_RS20225 - gamma carbonic anhydrase family protein, at 4,176,332 to 4,176,856 _RS20225 ABID97_RS20230: ABID97_RS20230 - ferritin-like domain-containing protein, at 4,176,896 to 4,177,711 _RS20230
Group Condition ABID97_RS20210 ABID97_RS20215 ABID97_RS20220 ABID97_RS20225 ABID97_RS20230
carbon source Adenine (C) -1.4 +0.0 +0.1 N.D. -0.1
carbon source Adenine (C) -1.2 -0.0 -0.1 N.D. +0.0
carbon source L-Phenylalanine (C) -0.7 +0.0 -0.2 N.D. -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.2 -0.1 N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +0.1 -0.3 N.D. -0.1
carbon source Tween 20 (C) -0.3 -0.2 -0.0 N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.1 -0.4 N.D. -0.1
carbon source D-Fructose (C) -0.3 -0.1 -0.2 N.D. +0.1
carbon source D-Xylose (C) -0.5 +0.2 -0.0 N.D. +0.0
carbon source D,L-Malic Acid (C) +0.5 -0.3 -0.4 N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.3 -0.5 N.D. -0.1
carbon source Gly-Glu (C) +0.3 -0.1 -0.4 N.D. +0.0
r2a outgrowth control R2A outgrowth control +0.3 -0.1 -0.3 N.D. -0.0
carbon source L-tyrosine (C) +0.6 -0.4 +0.3 N.D. -0.5
carbon source D-Sorbitol (C) +0.4 -0.1 -0.1 N.D. -0.2
carbon source D-Mannose (C) +0.3 -0.0 -0.2 N.D. +0.2
r2a outgrowth control R2A outgrowth control +0.5 -0.1 -0.4 N.D. +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.3 +0.2 -0.2 N.D. +0.1
carbon source D-Gluconic Acid (C) +0.3 +0.3 -0.2 N.D. +0.1
carbon source butyrate (C) +0.6 +0.2 -0.4 N.D. +0.1
carbon source L-Alanine (C) +0.6 -0.1 +0.0 N.D. +0.0
carbon source D-Mannose (C) +0.5 +0.1 -0.1 N.D. +0.1
control NP +0.6 +0.0 -0.1 N.D. +0.2
carbon source D-Arabinose (C) +0.8 +0.1 -0.0 N.D. -0.1
carbon source butyrate (C) +0.8 +0.1 -0.2 N.D. +0.2
carbon source propionate (C) -0.4 +0.4 +0.6 N.D. +0.3
phage V2_10 +0.3 +0.3 +0.1 N.D. +0.3
phage V2_10 +0.4 +0.2 +0.0 N.D. +0.4
carbon source L-Alanine (C) +0.2 -0.1 +0.0 N.D. +0.9
carbon source 4-Hydroxybenzoic Acid (C) +0.9 -0.0 +0.1 N.D. +0.0
remove
ABID97_RS20210
plot		 remove
ABID97_RS20215
plot		 remove
ABID97_RS20220		 remove
ABID97_RS20225
plot		 remove
ABID97_RS20230
plot