Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20195 and ABID97_RS20200 are separated by 13 nucleotidesABID97_RS20200 and ABID97_RS20205 are separated by 181 nucleotidesABID97_RS20205 and ABID97_RS20210 overlap by 4 nucleotidesABID97_RS20210 and ABID97_RS20215 overlap by 1 nucleotides ABID97_RS20195: ABID97_RS20195 - phosphopyruvate hydratase, at 4,171,225 to 4,172,508 _RS20195 ABID97_RS20200: ABID97_RS20200 - cell division protein FtsB, at 4,172,522 to 4,172,800 _RS20200 ABID97_RS20205: ABID97_RS20205 - nicotinamide riboside transporter PnuC, at 4,172,982 to 4,173,605 _RS20205 ABID97_RS20210: ABID97_RS20210 - ATP-binding protein, at 4,173,602 to 4,174,300 _RS20210 ABID97_RS20215: ABID97_RS20215 - hypothetical protein, at 4,174,300 to 4,175,277 _RS20215
Group Condition ABID97_RS20195 ABID97_RS20200 ABID97_RS20205 ABID97_RS20210 ABID97_RS20215
carbon source Adenine (C) N.D. N.D. -2.0 -1.4 +0.0
carbon source Adenine (C) N.D. N.D. -1.5 -1.2 -0.0
carbon source L-Phenylalanine (C) N.D. N.D. +0.1 -0.7 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.2 -0.6 +0.1
plant outgrowth control Plant outgrowth control N.D. N.D. -0.3 -0.2 -0.2
carbon source D-Xylose (C) N.D. N.D. -0.2 -0.5 +0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.1 -0.3 -0.2
carbon source propionate (C) N.D. N.D. -0.3 -0.4 +0.4
carbon source L-tyrosine (C) N.D. N.D. -0.1 +0.6 -0.4
phage V1_10 N.D. N.D. -0.3 +0.0 +0.4
phage V2_10 N.D. N.D. -0.2 +0.4 +0.2
phage V2_100 N.D. N.D. -0.1 +0.2 +0.3
carbon source Gly-Glu (C) N.D. N.D. +0.3 +0.3 -0.1
carbon source D-Sorbitol (C) N.D. N.D. +0.2 +0.4 -0.1
control NP N.D. N.D. -0.1 +0.6 +0.0
carbon source D,L-Malic Acid (C) N.D. N.D. +0.4 +0.5 -0.3
carbon source D-Mannose (C) N.D. N.D. +0.0 +0.5 +0.1
phage V2_10 N.D. N.D. +0.1 +0.3 +0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.2 +0.3 +0.2
carbon source D-Gluconic Acid (C) N.D. N.D. +0.2 +0.3 +0.3
carbon source L-Histidine (C) N.D. N.D. +0.3 +0.4 +0.1
carbon source L-Glutamic (C) N.D. N.D. +0.3 +0.3 +0.2
carbon source L-Alanine (C) N.D. N.D. +0.3 +0.6 -0.1
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.3 +0.5 -0.1
carbon source D-Arabinose (C) N.D. N.D. -0.0 +0.8 +0.1
carbon source Glucuronamide (C) N.D. N.D. +0.3 +0.4 +0.2
carbon source Glucuronamide (C) N.D. N.D. +0.4 +0.5 -0.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.4 +0.9 -0.0
carbon source butyrate (C) N.D. N.D. +0.6 +0.8 +0.1
carbon source butyrate (C) N.D. N.D. +1.1 +0.6 +0.2
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ABID97_RS20195
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ABID97_RS20200
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ABID97_RS20215
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