Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20155 and ABID97_RS20160 are separated by 91 nucleotidesABID97_RS20160 and ABID97_RS20165 are separated by 159 nucleotidesABID97_RS20165 and ABID97_RS20170 are separated by 2 nucleotidesABID97_RS20170 and ABID97_RS20175 overlap by 1 nucleotides ABID97_RS20155: ABID97_RS20155 - peptidylprolyl isomerase, at 4,164,753 to 4,165,277 _RS20155 ABID97_RS20160: ABID97_RS20160 - glycine zipper 2TM domain-containing protein, at 4,165,369 to 4,165,869 _RS20160 ABID97_RS20165: ABID97_RS20165 - dUTP diphosphatase, at 4,166,029 to 4,166,475 _RS20165 ABID97_RS20170: ABID97_RS20170 - hypothetical protein, at 4,166,478 to 4,166,927 _RS20170 ABID97_RS20175: ABID97_RS20175 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 4,166,927 to 4,168,150 _RS20175
Group Condition ABID97_RS20155 ABID97_RS20160 ABID97_RS20165 ABID97_RS20170 ABID97_RS20175
carbon source L-Histidine (C) -0.5 -0.6 N.D. -0.2 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.6 N.D. -0.0 N.D.
carbon source D,L-Malic Acid (C) -0.5 -0.4 N.D. +0.2 N.D.
phage V2_100 -0.3 -0.1 N.D. -0.3 N.D.
carbon source Adenine (C) -0.3 -0.5 N.D. +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.4 N.D. -0.0 N.D.
control NP -0.3 -0.2 N.D. -0.1 N.D.
phage V1_1 -0.1 -0.2 N.D. -0.2 N.D.
carbon source D-Sorbitol (C) -0.3 -0.3 N.D. +0.1 N.D.
carbon source L-tyrosine (C) -0.4 -0.4 N.D. +0.3 N.D.
carbon source L-Leucine (C) -0.3 -0.3 N.D. +0.1 N.D.
carbon source L-Asparagine (C) -0.3 -0.3 N.D. +0.2 N.D.
carbon source pyruvate (C) -0.4 -0.2 N.D. +0.3 N.D.
carbon source Tween 20 (C) -0.2 -0.2 N.D. +0.2 N.D.
carbon source L-Tryptophan (C) -0.3 -0.1 N.D. +0.2 N.D.
carbon source L-Proline (C) -0.3 -0.1 N.D. +0.3 N.D.
carbon source L-Phenylalanine (C) -0.3 -0.1 N.D. +0.3 N.D.
carbon source Formate (C) +0.1 -0.6 N.D. +0.5 N.D.
carbon source D-Gluconic Acid (C) -0.3 +0.2 N.D. +0.1 N.D.
carbon source propionate (C) -0.1 -0.3 N.D. +0.5 N.D.
carbon source Gly-Glu (C) +0.1 -0.3 N.D. +0.3 N.D.
carbon source D,L-Malic Acid (C) +0.2 -0.3 N.D. +0.2 N.D.
carbon source L-Threonine (C) +0.3 -0.4 N.D. +0.2 N.D.
carbon source Glucuronamide (C) -0.1 -0.2 N.D. +0.5 N.D.
r2a outgrowth control R2A outgrowth control -0.2 +0.5 N.D. -0.0 N.D.
carbon source Adenine (C) -0.2 +0.2 N.D. +0.3 N.D.
carbon source casaminos (C) -0.1 -0.2 N.D. +0.6 N.D.
carbon source D-Serine (C) +0.3 -0.1 N.D. +0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.8 N.D. +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.4 N.D. +0.1 N.D.
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