Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS20045 and ABID97_RS20050 are separated by 49 nucleotidesABID97_RS20050 and ABID97_RS20055 are separated by 26 nucleotidesABID97_RS20055 and ABID97_RS20060 are separated by 254 nucleotidesABID97_RS20060 and ABID97_RS20065 are separated by 4 nucleotides ABID97_RS20045: ABID97_RS20045 - transporter substrate-binding domain-containing protein, at 4,143,296 to 4,144,093 _RS20045 ABID97_RS20050: ABID97_RS20050 - amino acid ABC transporter permease, at 4,144,143 to 4,144,796 _RS20050 ABID97_RS20055: ABID97_RS20055 - amino acid ABC transporter permease, at 4,144,823 to 4,145,494 _RS20055 ABID97_RS20060: ABID97_RS20060 - hypothetical protein, at 4,145,749 to 4,147,353 _RS20060 ABID97_RS20065: ABID97_RS20065 - cysteine hydrolase family protein, at 4,147,358 to 4,147,888 _RS20065
Group Condition ABID97_RS20045 ABID97_RS20050 ABID97_RS20055 ABID97_RS20060 ABID97_RS20065
carbon source D-Gluconic Acid (C) N.D. -1.4 -1.1 +0.1 +0.2
carbon source D-Gluconic Acid (C) N.D. -0.7 -1.0 -0.0 -0.0
carbon source Formate (C) N.D. -0.1 +0.2 -0.5 -0.9
carbon source a-Ketoglutaric (C) N.D. -1.1 +0.5 -0.2 -0.3
carbon source L-Glutamic (C) N.D. -0.5 +0.1 -0.3 -0.2
carbon source Glucuronamide (C) N.D. -0.6 +0.1 -0.3 -0.2
carbon source Glycerol (C) N.D. -0.6 +0.2 -0.2 -0.3
carbon source L-tyrosine (C) N.D. -0.5 -0.9 +0.3 +0.3
carbon source D-Xylose (C) N.D. -0.1 +0.3 -0.1 -0.8
carbon source L-Asparagine (C) N.D. -0.6 +0.2 -0.0 -0.2
carbon source butyrate (C) N.D. -0.4 -0.7 -0.1 +0.6
carbon source D,L-Malic Acid (C) N.D. -0.4 +0.6 -0.5 -0.2
carbon source L-Histidine (C) N.D. +0.1 -0.4 +0.3 -0.3
phage V2_100 N.D. -0.2 +0.5 +0.1 -0.5
carbon source Ethanol (C) N.D. -0.1 +0.5 -0.3 -0.2
carbon source L-Tryptophan (C) N.D. -0.2 +0.4 +0.1 -0.3
carbon source L-Alanine (C) N.D. -0.1 +0.6 -0.0 -0.6
carbon source D-Serine (C) N.D. -0.6 +0.1 +0.4 +0.1
carbon source D-Ribose (C) N.D. +0.8 -0.8 -0.2 +0.3
phage V2_1 N.D. +0.4 +0.3 -0.1 -0.3
carbon source D-Fructose (C) N.D. -0.4 +0.2 +0.3 +0.3
carbon source propionate (C) N.D. +0.6 +0.9 +0.2 -1.3
carbon source Fumarate (C) N.D. -0.3 +0.2 +0.5 -0.1
carbon source D-Galactose (C) N.D. -0.3 +0.6 -0.0 +0.1
carbon source D-Ribose (C) N.D. -0.4 +0.3 +0.2 +0.3
carbon source L-Fucose (C) N.D. +0.6 +0.1 -0.3 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +1.2 +0.2 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.3 +0.5 -0.2 +0.1
carbon source L-tyrosine (C) N.D. -0.5 +1.1 +0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.3 +1.0 +0.1 +0.3
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