Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS19890 and ABID97_RS19895 are separated by 39 nucleotidesABID97_RS19895 and ABID97_RS19900 are separated by 86 nucleotidesABID97_RS19900 and ABID97_RS19905 are separated by 25 nucleotidesABID97_RS19905 and ABID97_RS19910 are separated by 31 nucleotides ABID97_RS19890: ABID97_RS19890 - mechanosensitive ion channel domain-containing protein, at 4,104,815 to 4,106,095 _RS19890 ABID97_RS19895: ABID97_RS19895 - histone deacetylase family protein, at 4,106,135 to 4,107,088 _RS19895 ABID97_RS19900: ABID97_RS19900 - MoxR family ATPase, at 4,107,175 to 4,108,095 _RS19900 ABID97_RS19905: ABID97_RS19905 - DUF58 domain-containing protein, at 4,108,121 to 4,109,092 _RS19905 ABID97_RS19910: ABID97_RS19910 - DUF3488 and transglutaminase-like domain-containing protein, at 4,109,124 to 4,111,142 _RS19910
Group Condition ABID97_RS19890 ABID97_RS19895 ABID97_RS19900 ABID97_RS19905 ABID97_RS19910
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -3.7 -0.1 -0.3 -0.3
carbon source L-Alanine (C) +0.0 -0.1 -0.3 -0.7 -0.3
carbon source L-Malic (C) -0.1 -0.2 -0.3 -0.6 -0.1
carbon source D,L-Lactate (C) -0.4 -0.2 -0.2 -0.5 +0.1
carbon source Glucuronamide (C) -0.1 -0.4 -0.1 -0.2 -0.6
carbon source D-Serine (C) -0.6 -0.0 -0.1 -0.3 -0.1
carbon source L-Alanine (C) -0.1 +0.0 -0.5 -0.6 -0.1
carbon source Tween 20 (C) -0.1 -1.3 -0.0 +0.4 -0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -1.8 +0.1 +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.2 +0.2 -0.8 -0.3
carbon source Tween 20 (C) +0.0 -1.2 -0.1 +0.6 -0.0
carbon source butyrate (C) +0.3 +0.2 -0.5 -0.1 -0.2
carbon source butyrate (C) +0.6 +0.2 -0.2 -0.6 -0.0
carbon source propionate (C) -0.5 +1.0 -0.2 -0.2 -0.1
control NP -0.4 +0.1 -0.0 +0.7 -0.1
r2a outgrowth control R2A outgrowth control +0.6 -0.2 -0.1 -0.1 +0.1
phage V2_1 -0.3 +0.2 +0.1 +0.5 +0.1
carbon source propionate (C) -0.2 +1.1 -0.2 -0.1 -0.1
carbon source Ethanol (C) -0.3 +0.1 +0.2 +0.2 +0.3
carbon source Glycolic Acid (C) +0.0 +0.6 -0.2 +0.4 +0.1
carbon source D-Lactate (C) +0.2 +0.2 +0.1 +0.3 +0.3
carbon source D-Glucose (C) +0.2 +0.3 +0.2 +0.1 +0.2
carbon source Ethanol (C) +0.2 +0.0 +0.4 +0.3 +0.2
carbon source D-Xylose (C) +0.1 +0.3 +0.2 +0.4 +0.1
carbon source L-Histidine (C) +0.3 +0.3 +0.1 +0.2 +0.4
carbon source a-Ketoglutaric (C) +0.1 -0.1 +0.2 +1.0 +0.1
phage V1_10 -0.0 +0.1 +0.4 +0.7 +0.2
carbon source L-tyrosine (C) +0.3 +0.1 -0.1 +0.5 +0.5
phage V1_10 -0.1 +0.3 +0.4 +0.4 +0.5
phage V2_100 +0.1 -0.2 +0.4 +0.7 +0.6
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